Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 MINOS1P4-201ENST00000515470 318 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 RNA5SP418-201ENST00000515951 117 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC008055.1-201ENST00000547032 609 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC009779.8-202ENST00000607990 932 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC006924.1-201ENST00000610750 559 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 OR7A1P-202ENST00000641542 1158 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 USP9YP3-201ENST00000434481 1766 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC125238.2-201ENST00000430003 1440 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ZNF101P1-201ENST00000435701 1720 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC092070.2-203ENST00000598377 3644 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 RN7SKP237-201ENST00000364663 301 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC003045.1-201ENST00000398779 713 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AL033519.1-201ENST00000407266 307 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 RPL24P2-201ENST00000421023 475 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 BX679664.2-201ENST00000439282 283 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 BMS1P11-201ENST00000442351 885 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 OR13K1P-201ENST00000444577 975 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 COX4I1P2-201ENST00000447446 547 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 BMS1P9-201ENST00000457640 885 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 MARK2P8-201ENST00000476069 952 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 RNA5SP206-201ENST00000516703 121 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC131935.1-201ENST00000524621 333 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC084851.2-201ENST00000530377 364 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 AC090651.1-201ENST00000567865 634 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 MIR7854-201ENST00000620068 65 ntBASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RSPO3Q9BXY4 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 SNORA70.9-201ENST00000384370 135 ntBASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 VIM2P-201ENST00000402383 1294 ntBASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 RN7SKP205-201ENST00000410999 307 ntBASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 RPL21P50-201ENST00000417698 477 ntBASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 AC002127.1-201ENST00000421305 225 ntBASIC5.77□□□□□ -1.49
RSPO3Q9BXY4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms