Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 ZNF806-201ENST00000438300 1774 ntBASIC4.32□□□□□ -1.72
SCXQ7RTU7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCXQ7RTU7 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCXQ7RTU7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PPBPP2-201ENST00000513150 1362 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RPL12P13-201ENST00000310055 497 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RN7SKP171-201ENST00000364417 303 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RN7SKP62-201ENST00000384539 329 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 UBBP1-201ENST00000392399 473 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PAICSP2-201ENST00000429118 1150 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 RPS10P21-201ENST00000430654 475 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 RPSAP32-201ENST00000432681 526 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AL451136.1-201ENST00000435399 325 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC128677.1-201ENST00000436016 442 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 GAPDHP37-201ENST00000442317 968 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 LAPTM4BP1-201ENST00000447781 690 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 MARK2P8-201ENST00000476069 952 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC135999.1-201ENST00000478962 479 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC131233.1-201ENST00000479200 955 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 CREM-242ENST00000490511 469 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC026826.1-201ENST00000493002 361 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 RN7SL187P-201ENST00000495587 303 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC063943.2-201ENST00000495697 534 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC026774.2-201ENST00000513990 1098 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC007068.2-201ENST00000543168 395 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 EEF1A1P17-201ENST00000547505 1275 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ULK4P1-202ENST00000565174 503 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RPL29P33-201ENST00000587474 316 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC011497.2-201ENST00000600255 639 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AL590032.1-201ENST00000604920 252 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC068726.1-201ENST00000610993 341 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 AL352984.2-201ENST00000611153 546 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AC089999.3-201ENST00000622440 577 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCXQ7RTU7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 ASNSP6-201ENST00000592770 1618 ntBASIC4.31□□□□□ -1.72
SCXQ7RTU7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCXQ7RTU7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms