Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AC026310.1-201ENST00000396004 378 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AL359694.1-201ENST00000403247 604 ntBASIC5.68□□□□□ -1.5
SRP9P49458 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.68□□□□□ -1.5
SRP9P49458 E2F6P1-201ENST00000428850 745 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.68□□□□□ -1.5
SRP9P49458 E2F6P3-201ENST00000441743 743 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 RPL26P30-201ENST00000453533 435 ntBASIC5.68□□□□□ -1.5
SRP9P49458 RPL31P11-202ENST00000454082 372 ntBASIC5.68□□□□□ -1.5
SRP9P49458 RN7SL70P-201ENST00000478322 302 ntBASIC5.68□□□□□ -1.5
SRP9P49458 RN7SL655P-201ENST00000486087 298 ntBASIC5.68□□□□□ -1.5
SRP9P49458 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AC009567.2-201ENST00000502989 349 ntBASIC5.68□□□□□ -1.5
SRP9P49458 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRP9P49458 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.68□□□□□ -1.5
SRP9P49458 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRP9P49458 HNRNPCP1-201ENST00000556181 766 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AC106785.4-201ENST00000569492 412 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC023389.2-201ENST00000580031 955 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AC011921.2-201ENST00000589465 152 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.68□□□□□ -1.5
SRP9P49458 AC091133.5-201ENST00000603088 301 ntBASIC5.68□□□□□ -1.5
SRP9P49458 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AL157899.1-201ENST00000604110 936 ntBASIC5.68□□□□□ -1.5
SRP9P49458 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.68□□□□□ -1.5
SRP9P49458 RPL12P48-201ENST00000605620 304 ntBASIC5.68□□□□□ -1.5
SRP9P49458 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 AC005514.1-201ENST00000623521 208 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AL162377.2-201ENST00000624532 337 ntBASIC5.68□□□□□ -1.5
SRP9P49458 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRP9P49458 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 SMG1P5-202ENST00000529428 4219 ntBASIC5.68□□□□□ -1.5
SRP9P49458 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 SMG1P2-201ENST00000566127 4221 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AC062022.1-201ENST00000451026 1684 ntBASIC5.68□□□□□ -1.5
SRP9P49458 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AC139426.3-201ENST00000605648 2059 ntBASIC5.68□□□□□ -1.5
SRP9P49458 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRP9P49458 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.68□□□□□ -1.5
SRP9P49458 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
SRP9P49458 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SRP9P49458 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 AC010132.4-201ENST00000569883 1368 ntBASIC5.67□□□□□ -1.5
SRP9P49458 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 CAP1P2-201ENST00000417455 1409 ntBASIC5.67□□□□□ -1.5
SRP9P49458 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.67□□□□□ -1.5
SRP9P49458 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 AL592429.1-201ENST00000403909 1473 ntBASIC5.67□□□□□ -1.5
SRP9P49458 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 AC092634.1-201ENST00000366505 199 ntBASIC5.67□□□□□ -1.5
SRP9P49458 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 MIR1266-201ENST00000408125 84 ntBASIC5.67□□□□□ -1.5
SRP9P49458 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.67□□□□□ -1.5
SRP9P49458 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SRP9P49458 AL929472.1-201ENST00000417484 429 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.67□□□□□ -1.5
SRP9P49458 SPATA20P1-201ENST00000423089 438 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AL589794.1-201ENST00000424971 390 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AL596268.1-201ENST00000427910 1048 ntBASIC5.67□□□□□ -1.5
SRP9P49458 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.67□□□□□ -1.5
SRP9P49458 AC133965.1-201ENST00000452984 354 ntBASIC5.67□□□□□ -1.5
SRP9P49458 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.67□□□□□ -1.5
SRP9P49458 RN7SL790P-201ENST00000474043 298 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms