Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AL359694.1-201ENST00000403247 604 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 UBE2V1P14-201ENST00000415815 558 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC093107.1-201ENST00000422772 609 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 VDAC2P3-201ENST00000430995 828 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 KRT18P53-201ENST00000431919 117 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC073410.1-201ENST00000435125 589 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 ANXA2P2-201ENST00000435128 1020 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 MED28P7-201ENST00000456611 530 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 SNORA35.1-201ENST00000458908 128 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC012123.2-201ENST00000485809 248 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC084033.2-201ENST00000551532 967 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 RN7SL664P-201ENST00000584239 305 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 COX6CP16-201ENST00000603667 216 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC092960.1-201ENST00000604762 351 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC243725.1-201ENST00000637164 436 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 MAPK10-350ENST00000641777 965 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DMAP28067 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AL136984.1-201ENST00000607611 1893 ntBASIC5.47□□□□□ -1.53
HLA-DMAP28067 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DMAP28067 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DMAP28067 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
HLA-DMAP28067 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DMAP28067 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DMAP28067 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DMAP28067 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.46□□□□□ -1.53
HLA-DMAP28067 AC004076.2-201ENST00000620532 3323 ntBASIC5.46□□□□□ -1.53
HLA-DMAP28067 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
HLA-DMAP28067 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.46□□□□□ -1.53
HLA-DMAP28067 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.46□□□□□ -1.53
HLA-DMAP28067 AC010266.2-201ENST00000564741 3255 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 RNA5SP114-201ENST00000363780 113 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 U3.14-201ENST00000365363 227 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 U3.43-201ENST00000410734 213 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC013403.1-201ENST00000436954 263 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC009518.3-201ENST00000438972 253 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC022206.1-201ENST00000495947 347 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 OR8Q1P-201ENST00000526467 655 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 LSM1P2-201ENST00000604911 322 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC106782.7-201ENST00000624024 418 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 AC133555.5-201ENST00000624430 418 ntBASIC5.46□□□□□ -1.54
HLA-DMAP28067 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
HLA-DMAP28067 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DMAP28067 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms