Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX3Q99909 RNA5SP176-201ENST00000390956 110 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AL713922.1-201ENST00000416477 747 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC018804.1-201ENST00000430381 618 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 RPL3P11-201ENST00000434028 1146 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 PPIAP32-201ENST00000449940 472 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 OR52Y1P-201ENST00000452418 828 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 RN7SL160P-201ENST00000468558 284 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AP001960.1-201ENST00000506494 658 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 RNU4-18P-201ENST00000516751 149 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 RN7SKP11-201ENST00000517018 287 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC113191.1-201ENST00000517759 403 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 IGLVV-66-201ENST00000523818 341 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC131935.1-201ENST00000524621 333 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC025423.2-201ENST00000537570 439 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC084033.1-201ENST00000550830 633 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AL132640.1-201ENST00000559594 619 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 LINC00556-201ENST00000569603 412 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 MIR378C-201ENST00000578683 81 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 RN7SL32P-201ENST00000580514 281 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 SNORA35B-201ENST00000607417 129 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.63□□□□□ -1.51
SSX3Q99909 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 AP001885.1-201ENST00000621658 558 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 AC005261.6-201ENST00000623072 1387 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
SSX3Q99909 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 CASC19-238ENST00000641523 1558 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSX3Q99909 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 AC016745.2-201ENST00000608834 3443 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX3Q99909 RNA5SP172-201ENST00000365061 118 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 AL590762.1-201ENST00000391782 432 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 RN7SKP148-201ENST00000410179 275 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 RPL17P17-201ENST00000419491 557 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX3Q99909 AL096803.1-201ENST00000456921 1021 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AP000805.1-201ENST00000471604 784 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC023827.2-201ENST00000566880 1061 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 MIR4312-201ENST00000579909 76 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX3Q99909 AC067838.1-201ENST00000606064 577 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 U91328.4-201ENST00000608919 517 ntBASIC5.62□□□□□ -1.51
SSX3Q99909 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms