Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 AL360013.1-201ENST00000419031 858 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 GAPDHP57-201ENST00000424400 585 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC099782.1-201ENST00000425889 474 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 MTATP6P11-201ENST00000428071 670 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 BX119904.3-201ENST00000428194 957 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD12P35452 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD12P35452 AC089999.1-201ENST00000460336 374 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 GLRXP3-201ENST00000470810 321 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXD12P35452 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 AC018797.1-201ENST00000510791 255 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 SNRPCP6-201ENST00000528310 210 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC007068.2-201ENST00000543168 395 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 NXPE2P1-201ENST00000543705 726 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.78□□□□□ -1.32
HOXD12P35452 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.78□□□□□ -1.32
HOXD12P35452 AC009955.2-201ENST00000597288 542 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AL590032.1-201ENST00000604920 252 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC092953.2-201ENST00000608000 699 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 AL391262.2-201ENST00000622466 494 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 AC012254.5-201ENST00000623573 478 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 MAPK10-350ENST00000641777 965 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HOXD12P35452 CUL4AP1-201ENST00000514750 1863 ntBASIC6.78□□□□□ -1.32
HOXD12P35452 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXD12P35452 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXD12P35452 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXD12P35452 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HOXD12P35452 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXD12P35452 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXD12P35452 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXD12P35452 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 QRSL1P1-201ENST00000400977 1540 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 API5P1-201ENST00000424316 1510 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXD12P35452 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXD12P35452 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXD12P35452 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 RNA5SP321-201ENST00000362722 111 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXD12P35452 RBBP4P5-201ENST00000398583 1266 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 RNA5SP115-201ENST00000411160 107 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 RPL17P17-201ENST00000419491 557 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXD12P35452 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 KCTD9P1-201ENST00000430462 1167 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 EIF5AP4-201ENST00000441206 465 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 POU5F1P5-201ENST00000445059 658 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 UBBP5-201ENST00000446970 266 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 AC131233.1-201ENST00000479200 955 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXD12P35452 SNX18P23-201ENST00000510867 677 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.77□□□□□ -1.33
HOXD12P35452 AC006512.2-201ENST00000543250 486 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXD12P35452 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXD12P35452 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.77□□□□□ -1.33
HOXD12P35452 AC091133.5-201ENST00000603088 301 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AC005229.3-201ENST00000603438 323 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 AC020923.1-201ENST00000624021 917 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXD12P35452 AL035425.4-201ENST00000624509 1063 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXD12P35452 MTCO1P22-201ENST00000604619 1360 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXD12P35452 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 ZNF806-201ENST00000438300 1774 ntBASIC6.77□□□□□ -1.33
HOXD12P35452 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXD12P35452 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
HOXD12P35452 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXD12P35452 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXD12P35452 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HOXD12P35452 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXD12P35452 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXD12P35452 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms