Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7□□□□□ -1.29
TPM1P09493 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7□□□□□ -1.29
TPM1P09493 RN7SL689P-201ENST00000577215 297 ntBASIC7□□□□□ -1.29
TPM1P09493 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7□□□□□ -1.29
TPM1P09493 HNRNPA3P9-201ENST00000604913 979 ntBASIC7□□□□□ -1.29
TPM1P09493 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 MIR6762-201ENST00000613340 86 ntBASIC7□□□□□ -1.29
TPM1P09493 AC026333.4-201ENST00000613543 544 ntBASIC7□□□□□ -1.29
TPM1P09493 AC007671.1-201ENST00000616957 830 ntBASIC7□□□□□ -1.29
TPM1P09493 AC022726.2-201ENST00000634673 547 ntBASIC7□□□□□ -1.29
TPM1P09493 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM1P09493 SAGE3P-201ENST00000619800 1635 ntBASIC7□□□□□ -1.29
TPM1P09493 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM1P09493 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 RNA5SP427-201ENST00000365323 119 ntBASIC6.99□□□□□ -1.29
TPM1P09493 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM1P09493 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 AC000089.1-201ENST00000424559 801 ntBASIC6.99□□□□□ -1.29
TPM1P09493 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM1P09493 ETF1P1-206ENST00000427296 984 ntBASIC6.99□□□□□ -1.29
TPM1P09493 PHBP4-201ENST00000437447 837 ntBASIC6.99□□□□□ -1.29
TPM1P09493 CR391992.1-201ENST00000438601 394 ntBASIC6.99□□□□□ -1.29
TPM1P09493 AC092967.1-201ENST00000449016 481 ntBASIC6.99□□□□□ -1.29
TPM1P09493 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM1P09493 AL022319.1-201ENST00000458183 1167 ntBASIC6.99□□□□□ -1.29
TPM1P09493 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 RN7SL37P-201ENST00000490461 307 ntBASIC6.99□□□□□ -1.29
TPM1P09493 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM1P09493 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM1P09493 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM1P09493 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TPM1P09493 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.99□□□□□ -1.29
TPM1P09493 SCARNA5-201ENST00000516201 276 ntBASIC6.99□□□□□ -1.29
TPM1P09493 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM1P09493 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.99□□□□□ -1.29
TPM1P09493 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 AC090651.1-201ENST00000567865 634 ntBASIC6.99□□□□□ -1.29
TPM1P09493 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.99□□□□□ -1.29
TPM1P09493 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.99□□□□□ -1.29
TPM1P09493 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.99□□□□□ -1.29
TPM1P09493 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.99□□□□□ -1.29
TPM1P09493 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 AL359976.1-201ENST00000418655 3528 ntBASIC6.99□□□□□ -1.29
TPM1P09493 RBPJP6-201ENST00000411556 1431 ntBASIC6.99□□□□□ -1.29
TPM1P09493 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TPM1P09493 AC092701.1-201ENST00000623627 1551 ntBASIC6.99□□□□□ -1.29
TPM1P09493 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TPM1P09493 AC015799.1-201ENST00000622996 3122 ntBASIC6.98□□□□□ -1.29
TPM1P09493 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 AOX3P-204ENST00000491025 2107 ntBASIC6.98□□□□□ -1.29
TPM1P09493 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
TPM1P09493 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TPM1P09493 RN7SKP130-201ENST00000364924 301 ntBASIC6.98□□□□□ -1.29
TPM1P09493 RNU2-5P-201ENST00000410533 180 ntBASIC6.98□□□□□ -1.29
TPM1P09493 RPL12P10-201ENST00000413498 498 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC007562.1-201ENST00000421819 517 ntBASIC6.98□□□□□ -1.29
TPM1P09493 GAPDHP33-201ENST00000443168 1013 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC023274.2-201ENST00000445264 521 ntBASIC6.98□□□□□ -1.29
TPM1P09493 UBBP5-201ENST00000446970 266 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC092421.1-201ENST00000448148 418 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.98□□□□□ -1.29
TPM1P09493 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM1P09493 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 RN7SL868P-201ENST00000485915 303 ntBASIC6.98□□□□□ -1.29
TPM1P09493 RPL5P14-201ENST00000494197 878 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM1P09493 OR4A40P-201ENST00000533878 948 ntBASIC6.98□□□□□ -1.29
TPM1P09493 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TPM1P09493 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM1P09493 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.98□□□□□ -1.29
TPM1P09493 AC093524.1-201ENST00000564266 1094 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.98□□□□□ -1.29
TPM1P09493 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.98□□□□□ -1.29
TPM1P09493 AC015674.1-201ENST00000578482 267 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AC011193.2-201ENST00000582638 367 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AL035417.2-201ENST00000603887 796 ntBASIC6.98□□□□□ -1.29
TPM1P09493 AL021368.3-201ENST00000607119 578 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms