Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AKR1D1P1-201ENST00000457236 936 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC089999.1-201ENST00000460336 374 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 RNU6-964P-201ENST00000516524 69 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC103855.4-201ENST00000533158 265 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 OR4H6P-201ENST00000563771 921 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC092718.4-201ENST00000566639 716 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC114477.1-201ENST00000605097 605 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 AC135068.11-201ENST00000636378 921 ntBASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TCRBV7S3A2A0A539 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL451046.1-201ENST00000406097 534 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 RNU4-64P-201ENST00000410795 131 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 NFU1P1-201ENST00000413128 774 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 RPS17P17-201ENST00000419392 409 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 TRIM60P13-201ENST00000432350 1283 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC009244.1-201ENST00000450566 258 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL513343.1-201ENST00000451818 792 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL133399.1-201ENST00000527476 298 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC006518.1-201ENST00000541449 943 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC004805.3-201ENST00000603178 310 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC005014.3-201ENST00000605985 190 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 MIR6085-201ENST00000618314 110 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC020923.1-201ENST00000624021 917 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC005355.2-201ENST00000625064 484 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC073365.1-203ENST00000641055 1992 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AL033543.1-201ENST00000623440 13454 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 AC005702.3-201ENST00000585345 1447 ntBASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TCRBV7S3A2A0A539 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 RPL31P11-201ENST00000426558 1558 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC005725.1-201ENST00000577346 2607 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms