Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
RPL39P62891 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 RN7SKP130-201ENST00000364924 301 ntBASIC4.39□□□□□ -1.71
RPL39P62891 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 AC074375.1-201ENST00000372993 192 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 RNU11-201ENST00000387069 134 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL445238.1-204ENST00000400311 463 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL121977.1-201ENST00000401636 979 ntBASIC4.39□□□□□ -1.71
RPL39P62891 SETP22-201ENST00000412243 957 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL662791.3-201ENST00000413771 776 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 AL731534.1-201ENST00000434711 269 ntBASIC4.39□□□□□ -1.71
RPL39P62891 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 UBBP5-201ENST00000446970 266 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 RN7SL91P-201ENST00000469313 291 ntBASIC4.39□□□□□ -1.71
RPL39P62891 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
RPL39P62891 RPL7AP30-201ENST00000482859 796 ntBASIC4.39□□□□□ -1.71
RPL39P62891 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 RN7SL776P-201ENST00000493390 268 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.39□□□□□ -1.71
RPL39P62891 CARSP2-201ENST00000520688 277 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.39□□□□□ -1.71
RPL39P62891 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.39□□□□□ -1.71
RPL39P62891 NPM1P42-201ENST00000560329 862 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AC233699.1-201ENST00000569955 1168 ntBASIC4.39□□□□□ -1.71
RPL39P62891 NPIPB1P-202ENST00000588786 828 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AL360012.1-201ENST00000602813 131 ntBASIC4.39□□□□□ -1.71
RPL39P62891 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL121782.1-201ENST00000611242 413 ntBASIC4.39□□□□□ -1.71
RPL39P62891 AL031658.2-201ENST00000616850 651 ntBASIC4.39□□□□□ -1.71
RPL39P62891 MIR6085-201ENST00000618314 110 ntBASIC4.39□□□□□ -1.71
RPL39P62891 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPL39P62891 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AC092701.1-201ENST00000623627 1551 ntBASIC4.39□□□□□ -1.71
RPL39P62891 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPL39P62891 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.39□□□□□ -1.71
RPL39P62891 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPL39P62891 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.38□□□□□ -1.71
RPL39P62891 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 AC138907.8-201ENST00000623981 2256 ntBASIC4.38□□□□□ -1.71
RPL39P62891 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RPL39P62891 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RPL39P62891 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 WDR95P-201ENST00000425638 1542 ntBASIC4.38□□□□□ -1.71
RPL39P62891 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RPL39P62891 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 PPIAP24-201ENST00000328558 471 ntBASIC4.38□□□□□ -1.71
RPL39P62891 SNORD1C-201ENST00000363315 78 ntBASIC4.38□□□□□ -1.71
RPL39P62891 RNA5SP152-201ENST00000365184 110 ntBASIC4.38□□□□□ -1.71
RPL39P62891 RNA5SP355-201ENST00000365317 135 ntBASIC4.38□□□□□ -1.71
RPL39P62891 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPL39P62891 MIR187-201ENST00000385062 109 ntBASIC4.38□□□□□ -1.71
RPL39P62891 AL079341.1-201ENST00000404701 1207 ntBASIC4.38□□□□□ -1.71
RPL39P62891 RN7SKP281-201ENST00000410472 352 ntBASIC4.38□□□□□ -1.71
RPL39P62891 RN7SKP17-201ENST00000411242 351 ntBASIC4.38□□□□□ -1.71
RPL39P62891 RANP6-201ENST00000413691 644 ntBASIC4.38□□□□□ -1.71
RPL39P62891 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms