Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC091982.1-202ENST00000473923 343 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 RPS17P11-201ENST00000474297 293 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.24□□□□□ -1.41
CLRN1P58418 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 NDUFA3P2-201ENST00000531434 232 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 MTCYBP23-201ENST00000558717 1102 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC023824.3-201ENST00000569003 562 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC087575.1-201ENST00000585087 229 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.24□□□□□ -1.41
CLRN1P58418 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 MTCO3P22-201ENST00000603219 784 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC011471.4-201ENST00000638271 216 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 AC006927.2-201ENST00000639256 389 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 AC022819.1-201ENST00000563495 3910 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 PWRN1-212ENST00000569908 1435 ntBASIC6.24□□□□□ -1.41
CLRN1P58418 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.24□□□□□ -1.41
CLRN1P58418 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.24□□□□□ -1.41
CLRN1P58418 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLRN1P58418 AC087392.3-202ENST00000358446 1754 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 DDX43P1-201ENST00000510713 1763 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 MTND5P31-201ENST00000419366 1374 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 RAD1P1-201ENST00000231383 813 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLRN1P58418 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC234772.1-201ENST00000377927 937 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 AL157698.1-201ENST00000415190 1011 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.23□□□□□ -1.41
CLRN1P58418 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 CLCN3P1-201ENST00000423965 1017 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC007563.3-201ENST00000433233 371 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 RPL29P7-201ENST00000440227 457 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AC245047.2-201ENST00000441060 530 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 MTCYBP21-201ENST00000443300 1113 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 DBIL5P2-201ENST00000443827 253 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC044797.1-201ENST00000445744 679 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 OR51P1P-201ENST00000447547 942 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AC020779.1-201ENST00000478757 796 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 RPL12P7-201ENST00000493832 494 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 ENPP7P3-201ENST00000509123 241 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 RNU6-311P-201ENST00000516224 102 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 SCARNA18.2-201ENST00000516882 84 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 EEF1B2P2-201ENST00000519625 676 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 ACTG1P15-201ENST00000570019 1063 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 DHFRP1-201ENST00000579682 559 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 EXOSC3P2-201ENST00000594464 497 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 GAS5-AS1-201ENST00000602767 694 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AC084373.1-201ENST00000603311 235 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AC005034.4-201ENST00000603612 899 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AL035417.2-201ENST00000603887 796 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms