Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC009948.3-201ENST00000603415 1798 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SCN4AP35499 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 AL121835.1-201ENST00000404250 354 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 H2AFZP6-201ENST00000444403 394 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC021269.1-201ENST00000526860 705 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 OR10G5P-201ENST00000532733 358 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.48□□□□□ -1.21
SCN4AP35499 AL356801.1-201ENST00000559320 294 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC044860.2-201ENST00000561005 179 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.48□□□□□ -1.21
SCN4AP35499 RPL12P48-201ENST00000605620 304 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 MIR7155-201ENST00000615925 56 ntBASIC7.48□□□□□ -1.21
SCN4AP35499 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.48□□□□□ -1.21
SCN4AP35499 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.48□□□□□ -1.21
SCN4AP35499 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SCN4AP35499 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SCN4AP35499 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 Z97832.2-201ENST00000605896 4261 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 MAPK10-323ENST00000641493 3207 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 AL132875.1-201ENST00000403623 949 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 RNA5SP156-201ENST00000410250 110 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 UBA52P7-201ENST00000486088 380 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 AC022206.1-201ENST00000495947 347 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 AC027026.1-201ENST00000532323 742 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.47□□□□□ -1.21
SCN4AP35499 IMMP1LP3-201ENST00000604197 224 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 MIR6748-201ENST00000610433 71 ntBASIC7.47□□□□□ -1.21
SCN4AP35499 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SCN4AP35499 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SCN4AP35499 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SCN4AP35499 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.46□□□□□ -1.21
SCN4AP35499 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.21
SCN4AP35499 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.21
SCN4AP35499 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 AP000534.2-201ENST00000412729 568 ntBASIC7.46□□□□□ -1.21
SCN4AP35499 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.46□□□□□ -1.21
SCN4AP35499 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.46□□□□□ -1.21
SCN4AP35499 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SCN4AP35499 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.46□□□□□ -1.21
SCN4AP35499 AL445649.1-201ENST00000615941 691 ntBASIC7.46□□□□□ -1.21
SCN4AP35499 AC068870.2-201ENST00000620635 389 ntBASIC7.46□□□□□ -1.21
SCN4AP35499 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SCN4AP35499 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SCN4AP35499 AC024651.2-201ENST00000562480 2098 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms