Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 RN7SL311P-201ENST00000579858 306 ntBASIC7.02□□□□□ -1.29
TPM1P09493 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 AP006587.6-201ENST00000582128 1091 ntBASIC7.02□□□□□ -1.29
TPM1P09493 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 AC091133.5-201ENST00000603088 301 ntBASIC7.02□□□□□ -1.29
TPM1P09493 AC116667.2-201ENST00000641075 823 ntBASIC7.02□□□□□ -1.29
TPM1P09493 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 AC137056.2-201ENST00000624055 1958 ntBASIC7.02□□□□□ -1.29
TPM1P09493 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 PSMC1P4-201ENST00000515236 1327 ntBASIC7.01□□□□□ -1.29
TPM1P09493 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 AC025470.1-201ENST00000510053 2032 ntBASIC7.01□□□□□ -1.29
TPM1P09493 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM1P09493 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 AC245036.1-201ENST00000391727 309 ntBASIC7.01□□□□□ -1.29
TPM1P09493 RN7SKP30-201ENST00000411373 334 ntBASIC7.01□□□□□ -1.29
TPM1P09493 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM1P09493 CLIC4P3-201ENST00000422221 752 ntBASIC7.01□□□□□ -1.29
TPM1P09493 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM1P09493 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM1P09493 RN7SL221P-201ENST00000466190 281 ntBASIC7.01□□□□□ -1.29
TPM1P09493 RPL19P11-201ENST00000495944 589 ntBASIC7.01□□□□□ -1.29
TPM1P09493 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.01□□□□□ -1.29
TPM1P09493 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.01□□□□□ -1.29
TPM1P09493 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 MIR4800-201ENST00000537353 80 ntBASIC7.01□□□□□ -1.29
TPM1P09493 AC007068.2-201ENST00000543168 395 ntBASIC7.01□□□□□ -1.29
TPM1P09493 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM1P09493 AC009120.3-201ENST00000563335 499 ntBASIC7.01□□□□□ -1.29
TPM1P09493 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 RPS27AP19-201ENST00000597285 458 ntBASIC7.01□□□□□ -1.29
TPM1P09493 AC024085.1-201ENST00000604299 432 ntBASIC7.01□□□□□ -1.29
TPM1P09493 AC005858.3-201ENST00000624756 589 ntBASIC7.01□□□□□ -1.29
TPM1P09493 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.01□□□□□ -1.29
TPM1P09493 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM1P09493 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM1P09493 PSMC1P6-201ENST00000477233 1319 ntBASIC7.01□□□□□ -1.29
TPM1P09493 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
TPM1P09493 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TPM1P09493 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
TPM1P09493 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TPM1P09493 USP9YP3-201ENST00000434481 1766 ntBASIC7□□□□□ -1.29
TPM1P09493 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
TPM1P09493 LRRC37A15P-201ENST00000514785 1355 ntBASIC7□□□□□ -1.29
TPM1P09493 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
TPM1P09493 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7□□□□□ -1.29
TPM1P09493 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TPM1P09493 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7□□□□□ -1.29
TPM1P09493 RPL5P20-201ENST00000403848 896 ntBASIC7□□□□□ -1.29
TPM1P09493 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7□□□□□ -1.29
TPM1P09493 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 AC091492.1-201ENST00000419844 272 ntBASIC7□□□□□ -1.29
TPM1P09493 RBMY2JP-201ENST00000425544 1059 ntBASIC7□□□□□ -1.29
TPM1P09493 AC009362.1-201ENST00000427253 406 ntBASIC7□□□□□ -1.29
TPM1P09493 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7□□□□□ -1.29
TPM1P09493 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7□□□□□ -1.29
TPM1P09493 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7□□□□□ -1.29
TPM1P09493 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 ST13P21-201ENST00000453250 1098 ntBASIC7□□□□□ -1.29
TPM1P09493 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 RN7SL456P-201ENST00000469290 295 ntBASIC7□□□□□ -1.29
TPM1P09493 TUBBP11-201ENST00000472255 252 ntBASIC7□□□□□ -1.29
TPM1P09493 RN7SL776P-201ENST00000493390 268 ntBASIC7□□□□□ -1.29
TPM1P09493 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7□□□□□ -1.29
TPM1P09493 RNA5SP400-201ENST00000517155 111 ntBASIC7□□□□□ -1.29
TPM1P09493 CARSP2-201ENST00000520688 277 ntBASIC7□□□□□ -1.29
TPM1P09493 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7□□□□□ -1.29
TPM1P09493 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7□□□□□ -1.29
TPM1P09493 AP000619.2-201ENST00000546014 969 ntBASIC7□□□□□ -1.29
TPM1P09493 AL121579.2-201ENST00000555466 590 ntBASIC7□□□□□ -1.29
TPM1P09493 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms