Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 RN7SL362P-201ENST00000494228 267 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 RNA5SP116-201ENST00000516132 98 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC104997.1-201ENST00000519761 717 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 LINC01613-201ENST00000561476 2780 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC133552.4-201ENST00000576103 676 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 OOSP1P2-201ENST00000579644 351 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC009032.1-201ENST00000617574 431 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 RAB28P4-201ENST00000622233 665 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 PRNCR1-201ENST00000635449 12727 ntBASIC9.18□□□□□ -0.94
USP35Q9P2H5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.18□□□□□ -0.94
USP35Q9P2H5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
USP35Q9P2H5 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC090220.1-201ENST00000593078 1699 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 EEF1A1P12-201ENST00000443590 1346 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 YWHAZP4-201ENST00000392459 708 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 YWHAZP6-201ENST00000399764 738 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 SNORA77.2-201ENST00000408571 112 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC026336.1-201ENST00000466577 351 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC094085.1-201ENST00000468914 584 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC131233.1-201ENST00000479200 955 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC091874.2-201ENST00000505889 720 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 RNA5SP278-201ENST00000517055 102 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL078601.3-201ENST00000573303 535 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL365223.1-201ENST00000574864 1297 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC104307.1-201ENST00000616142 196 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC091948.2-201ENST00000636510 279 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 AL669831.5-218ENST00000591702 1873 ntBASIC9.17□□□□□ -0.94
USP35Q9P2H5 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
USP35Q9P2H5 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
USP35Q9P2H5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AL359263.1-201ENST00000441188 2796 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC122713.2-201ENST00000624942 3335 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms