Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RNF144AP50876 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 RNU6-660P-201ENST00000364566 109 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 Y_RNA.326-201ENST00000365176 113 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MIR146B-201ENST00000365699 73 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 Y_RNA.402-201ENST00000383972 102 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 Y_RNA.573-201ENST00000384763 105 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 MIR1184-2-201ENST00000408263 99 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MIR1184-1-201ENST00000408606 99 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MIR1184-3-201ENST00000408676 99 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 BTF3P9-201ENST00000418784 283 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 MTND2P23-201ENST00000422990 651 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC104843.2-201ENST00000427666 297 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 ELOCP14-201ENST00000428070 331 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MTCO1P3-201ENST00000429327 192 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 AL355149.1-201ENST00000438396 882 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 ELOCP7-201ENST00000439968 331 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC243962.1-201ENST00000441512 579 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC092431.2-201ENST00000441658 318 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 OR7E125P-201ENST00000443450 846 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 BMS1P10-201ENST00000443754 1120 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 LDHAP3-201ENST00000448312 1008 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 TMEM97P1-201ENST00000452969 451 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 PNPLA4P1-201ENST00000458328 305 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 FTH1P4-201ENST00000480365 553 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 PLA2G12AP1-201ENST00000497678 568 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC073648.3-201ENST00000504939 925 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC122718.2-201ENST00000505325 591 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 PTGES3P3-201ENST00000511479 482 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 SNORA31.13-201ENST00000516624 135 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 RNA5SP101-201ENST00000517036 108 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 STMN2-203ENST00000518491 585 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 IGHV3-32-201ENST00000519182 355 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 KCTD9P6-201ENST00000522306 950 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 OR5AQ1P-201ENST00000527596 927 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 PDCL3P1-201ENST00000534575 734 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF144AP50876 AL352979.1-201ENST00000554238 297 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 NPM1P5-201ENST00000557228 838 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MPPE1P1-201ENST00000557286 1076 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF144AP50876 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 MIR3680-2-201ENST00000578247 87 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF144AP50876 MIR3680-1-201ENST00000581433 87 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MIR4450-201ENST00000583589 65 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF144AP50876 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 BNIP3P11-201ENST00000603878 563 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC008277.2-201ENST00000605196 797 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC113554.1-201ENST00000606284 490 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC002059.1-201ENST00000608014 477 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 MIR6505-201ENST00000617206 71 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 RMST_5.1-201ENST00000618704 126 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
RNF144AP50876 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 AL031123.2-201ENST00000563225 3325 ntBASIC7.72□□□□□ -1.17
RNF144AP50876 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF144AP50876 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF144AP50876 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF144AP50876 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
RNF144AP50876 AC091305.2-201ENST00000624049 1576 ntBASIC7.71□□□□□ -1.17
RNF144AP50876 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.71□□□□□ -1.17
RNF144AP50876 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 294.8 ms