Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC010624.4-201ENST00000597606 1351 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 RN7SKP130-201ENST00000364924 301 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC092634.1-201ENST00000366505 199 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ARSFP1-201ENST00000398758 477 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AL079341.1-201ENST00000404701 1207 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 MIR1266-201ENST00000408125 84 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 RNA5SP115-201ENST00000411160 107 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AL589794.1-201ENST00000424971 390 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AP003385.1-201ENST00000426387 893 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 BMP6P1-201ENST00000431230 679 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AK3P5-201ENST00000432033 519 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC234771.4-201ENST00000441416 730 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AL355355.1-201ENST00000442900 793 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 SNRPBP1-201ENST00000443634 282 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 NPM1P9-201ENST00000453156 844 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 RN7SL502P-201ENST00000481857 290 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC009567.2-201ENST00000502989 349 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC084337.1-201ENST00000524809 686 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 ASB8-207ENST00000536953 923 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ANP32BP1-202ENST00000568553 737 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AP003115.1-201ENST00000569849 463 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC036176.3-201ENST00000602456 418 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 SNORD96A-201ENST00000606577 79 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC025171.4-201ENST00000607250 1047 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC021422.1-201ENST00000621212 473 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 RBPJP6-201ENST00000411556 1431 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC095038.1-201ENST00000429248 1591 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DMBP28068 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 PSMC1P6-201ENST00000477233 1319 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC022613.3-201ENST00000560740 1346 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 AC023632.6-201ENST00000624338 2177 ntBASIC4.94□□□□□ -1.62
HLA-DMBP28068 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DMBP28068 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 SNORA70.9-201ENST00000384370 135 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC006509.1-201ENST00000420788 634 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC009237.1-201ENST00000442127 744 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 RN7SKP198-201ENST00000459286 306 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC099340.1-201ENST00000475247 599 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AL390198.2-201ENST00000510553 222 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC008429.2-201ENST00000523057 864 ntBASIC4.93□□□□□ -1.62
HLA-DMBP28068 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DMBP28068 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms