Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM1P09493 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.04□□□□□ -1.28
TPM1P09493 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.04□□□□□ -1.28
TPM1P09493 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 EXOSC3P2-201ENST00000594464 497 ntBASIC7.04□□□□□ -1.28
TPM1P09493 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM1P09493 BX284613.1-201ENST00000452221 1641 ntBASIC7.04□□□□□ -1.28
TPM1P09493 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
TPM1P09493 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TPM1P09493 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TPM1P09493 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TPM1P09493 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.03□□□□□ -1.28
TPM1P09493 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.03□□□□□ -1.28
TPM1P09493 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 BIN2P1-201ENST00000504996 1530 ntBASIC7.03□□□□□ -1.28
TPM1P09493 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TPM1P09493 MIR99A-201ENST00000384906 81 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AL662791.3-201ENST00000413771 776 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM1P09493 ATP5LP4-201ENST00000434169 307 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.03□□□□□ -1.28
TPM1P09493 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM1P09493 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM1P09493 AC099340.1-201ENST00000475247 599 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC010442.1-201ENST00000515583 816 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM1P09493 AC107952.1-201ENST00000524200 376 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM1P09493 SETP17-201ENST00000534163 817 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM1P09493 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.03□□□□□ -1.28
TPM1P09493 MIR5682-201ENST00000584864 76 ntBASIC7.03□□□□□ -1.28
TPM1P09493 AL445649.1-201ENST00000615941 691 ntBASIC7.03□□□□□ -1.28
TPM1P09493 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM1P09493 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM1P09493 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TPM1P09493 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.03□□□□□ -1.28
TPM1P09493 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.03□□□□□ -1.28
TPM1P09493 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TPM1P09493 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.02□□□□□ -1.28
TPM1P09493 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.28
TPM1P09493 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 WDR95P-201ENST00000425638 1542 ntBASIC7.02□□□□□ -1.29
TPM1P09493 LINC01808-203ENST00000641932 1643 ntBASIC7.02□□□□□ -1.29
TPM1P09493 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TPM1P09493 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 RNU6-316P-201ENST00000391027 107 ntBASIC7.02□□□□□ -1.29
TPM1P09493 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 AL121835.1-201ENST00000404250 354 ntBASIC7.02□□□□□ -1.29
TPM1P09493 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM1P09493 AL359633.1-201ENST00000421403 310 ntBASIC7.02□□□□□ -1.29
TPM1P09493 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TPM1P09493 AC114402.2-201ENST00000432760 643 ntBASIC7.02□□□□□ -1.29
TPM1P09493 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 SNRPCP3-201ENST00000474888 476 ntBASIC7.02□□□□□ -1.29
TPM1P09493 RPS16P9-201ENST00000477220 427 ntBASIC7.02□□□□□ -1.29
TPM1P09493 Z99943.2-201ENST00000507585 266 ntBASIC7.02□□□□□ -1.29
TPM1P09493 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 AC097460.2-201ENST00000511857 741 ntBASIC7.02□□□□□ -1.29
TPM1P09493 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.02□□□□□ -1.29
TPM1P09493 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM1P09493 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM1P09493 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms