Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC026310.1-201ENST00000396004 378 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 CASKP1-201ENST00000412870 582 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 TREML3P-201ENST00000457327 501 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC236972.4-201ENST00000458091 963 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC099340.1-201ENST00000475247 599 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC113398.2-201ENST00000507630 558 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AL390198.2-201ENST00000510553 222 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AP002004.1-206ENST00000532441 876 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 MIR3159-201ENST00000584572 74 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC060766.1-201ENST00000590824 627 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC011497.2-201ENST00000600255 639 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC005277.2-201ENST00000617898 390 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC091059.2-201ENST00000623355 614 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC018692.2-201ENST00000624130 348 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC114546.4-201ENST00000624413 369 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC005858.3-201ENST00000624756 589 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC073488.9-201ENST00000631601 754 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 TMCC1P1-201ENST00000518897 1980 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AL512353.3-201ENST00000417517 1326 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC013488.1-201ENST00000526618 1838 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 MAPK10-261ENST00000641050 3109 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC010401.2-201ENST00000575137 4934 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC009779.8-201ENST00000641684 4384 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC007068.1-201ENST00000396690 844 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 FDPSP5-201ENST00000399474 1057 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RPL12P23-201ENST00000405880 490 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AL353133.1-201ENST00000407695 401 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 CBX1P3-201ENST00000413296 527 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 BX119904.3-201ENST00000428194 957 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RPL3P11-201ENST00000434028 1146 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC018639.1-201ENST00000492994 442 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SNORA58-201ENST00000505219 137 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RNA5SP96-201ENST00000516041 107 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RN7SKP196-201ENST00000516267 345 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 Vault.2-201ENST00000516519 98 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC026956.1-201ENST00000558741 396 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AL953862.2-201ENST00000603089 820 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 DIMT1P1-201ENST00000603970 763 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 AC004241.2-201ENST00000614562 444 ntBASIC5.91□□□□□ -1.46
NHLRC1Q6VVB1 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms