Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SETP12-201ENST00000514068 805 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC114477.1-201ENST00000605097 605 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 U1.41-201ENST00000617626 165 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 TCL6_3.1-201ENST00000619064 137 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AP001885.1-201ENST00000621658 558 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC091059.2-201ENST00000623355 614 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL356094.1-201ENST00000624663 1212 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 SAGE3P-201ENST00000619800 1635 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC067942.1-201ENST00000488045 1493 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC010894.1-201ENST00000313760 361 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC019178.1-201ENST00000392337 440 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 OR52N3P-201ENST00000413417 934 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AP003385.1-201ENST00000426387 893 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC003989.1-201ENST00000434569 565 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 BMS1P11-201ENST00000442351 885 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 BMS1P9-201ENST00000457640 885 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC063955.1-201ENST00000462872 685 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 MTCO1P55-201ENST00000489829 745 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 LDHAP1-201ENST00000509421 992 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 SNRPGP1-201ENST00000553864 222 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC007620.3-201ENST00000608131 497 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 MIR6070-201ENST00000613967 103 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC073342.2-201ENST00000595842 1800 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC105235.1-201ENST00000623208 1816 ntBASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNF549Q6P9A3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 SNORA7A-201ENST00000384765 139 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 VN1R53P-201ENST00000429536 957 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 MED28P4-201ENST00000433137 572 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 COL11A2P1-205ENST00000441798 676 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL020997.1-201ENST00000446554 349 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 RPL17P2-201ENST00000491913 451 ntBASIC6.4□□□□□ -1.38
ZNF549Q6P9A3 AC139272.1-201ENST00000505516 640 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms