Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RAB9AP4-201ENST00000415230 609 ntBASIC5.5□□□□□ -1.53
CDX1P47902 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.5□□□□□ -1.53
CDX1P47902 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 CDY8P-201ENST00000428380 1279 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AC114402.2-201ENST00000432760 643 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 AC009518.3-201ENST00000438972 253 ntBASIC5.5□□□□□ -1.53
CDX1P47902 BX005266.3-201ENST00000443013 1075 ntBASIC5.5□□□□□ -1.53
CDX1P47902 CDY20P-201ENST00000447528 1279 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 GAPDHP53-201ENST00000458397 924 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.5□□□□□ -1.53
CDX1P47902 RN7SL868P-201ENST00000485915 303 ntBASIC5.5□□□□□ -1.53
CDX1P47902 RPS4XP23-201ENST00000487801 237 ntBASIC5.5□□□□□ -1.53
CDX1P47902 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.5□□□□□ -1.53
CDX1P47902 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 AC105420.1-201ENST00000504389 582 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AC093325.1-201ENST00000508378 326 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.5□□□□□ -1.53
CDX1P47902 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 KCTD9P4-201ENST00000526766 1166 ntBASIC5.5□□□□□ -1.53
CDX1P47902 OR9L1P-201ENST00000529493 933 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 MIR4800-201ENST00000537353 80 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.5□□□□□ -1.53
CDX1P47902 MIR5682-201ENST00000584864 76 ntBASIC5.5□□□□□ -1.53
CDX1P47902 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 AC020915.5-201ENST00000596836 964 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AC125494.2-201ENST00000602431 657 ntBASIC5.5□□□□□ -1.53
CDX1P47902 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.5□□□□□ -1.53
CDX1P47902 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDX1P47902 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AC004836.1-201ENST00000623032 634 ntBASIC5.5□□□□□ -1.53
CDX1P47902 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.5□□□□□ -1.53
CDX1P47902 AC140479.4-205ENST00000636339 820 ntBASIC5.5□□□□□ -1.53
CDX1P47902 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDX1P47902 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 AC005261.6-201ENST00000623072 1387 ntBASIC5.5□□□□□ -1.53
CDX1P47902 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 AC104837.1-201ENST00000444644 1587 ntBASIC5.5□□□□□ -1.53
CDX1P47902 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDX1P47902 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDX1P47902 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDX1P47902 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.49□□□□□ -1.53
CDX1P47902 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDX1P47902 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDX1P47902 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CDX1P47902 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.49□□□□□ -1.53
CDX1P47902 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDX1P47902 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDX1P47902 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDX1P47902 RN7SKP107-201ENST00000364157 290 ntBASIC5.49□□□□□ -1.53
CDX1P47902 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDX1P47902 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDX1P47902 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 AL713922.1-201ENST00000416477 747 ntBASIC5.49□□□□□ -1.53
CDX1P47902 RCC2P2-201ENST00000422174 918 ntBASIC5.49□□□□□ -1.53
CDX1P47902 MRPS21P2-201ENST00000424704 264 ntBASIC5.49□□□□□ -1.53
CDX1P47902 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 SNX19-202ENST00000426933 888 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 AL121916.1-201ENST00000429405 308 ntBASIC5.49□□□□□ -1.53
CDX1P47902 MAPRE1P3-201ENST00000435438 796 ntBASIC5.49□□□□□ -1.53
CDX1P47902 CHCHD4P5-201ENST00000436684 427 ntBASIC5.49□□□□□ -1.53
CDX1P47902 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
CDX1P47902 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.49□□□□□ -1.53
CDX1P47902 AL356390.1-201ENST00000455684 397 ntBASIC5.49□□□□□ -1.53
CDX1P47902 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 AC079193.1-201ENST00000460497 588 ntBASIC5.49□□□□□ -1.53
CDX1P47902 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.49□□□□□ -1.53
CDX1P47902 IGLC4-201ENST00000517690 248 ntBASIC5.49□□□□□ -1.53
CDX1P47902 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms