Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL451136.1-201ENST00000435399 325 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC022415.1-202ENST00000486612 523 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 RNU2-45P-201ENST00000516068 187 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC036176.3-201ENST00000602456 418 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN9P43378 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN9P43378 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
PTPN9P43378 AC010401.2-201ENST00000575137 4934 ntBASIC6.8□□□□□ -1.32
PTPN9P43378 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN9P43378 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PTPN9P43378 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN9P43378 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PTPN9P43378 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 STAG3L4-201ENST00000352103 530 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 SNORD94-201ENST00000386037 137 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.79□□□□□ -1.32
PTPN9P43378 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 PSMD8P1-201ENST00000436275 769 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.79□□□□□ -1.32
PTPN9P43378 GAPDHP37-201ENST00000442317 968 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 WDR82P2-201ENST00000444540 928 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.79□□□□□ -1.32
PTPN9P43378 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.79□□□□□ -1.32
PTPN9P43378 RPS4XP17-201ENST00000479057 754 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 OR52A4P-203ENST00000498233 1014 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 KCTD9P4-201ENST00000526766 1166 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 OR9G2P-201ENST00000533326 880 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.79□□□□□ -1.32
PTPN9P43378 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.79□□□□□ -1.32
PTPN9P43378 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 AC022001.1-201ENST00000605193 268 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 MIR6774-201ENST00000614651 70 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 MRPL57P1-201ENST00000621486 265 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PTPN9P43378 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 AC067942.1-201ENST00000488045 1493 ntBASIC6.79□□□□□ -1.32
PTPN9P43378 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.79□□□□□ -1.32
PTPN9P43378 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PTPN9P43378 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 WBP11P1-201ENST00000562560 1931 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC245036.1-201ENST00000391727 309 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AL391419.1-201ENST00000398901 1275 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms