Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PPP1R11P1-201ENST00000486095 376 ntBASIC6.04□□□□□ -1.44
RFC3P40938 RPL37P23-201ENST00000492641 294 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AC026826.1-201ENST00000493002 361 ntBASIC6.04□□□□□ -1.44
RFC3P40938 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC3P40938 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC3P40938 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.04□□□□□ -1.44
RFC3P40938 AC009729.1-201ENST00000548873 1133 ntBASIC6.04□□□□□ -1.44
RFC3P40938 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 AC011921.2-201ENST00000589465 152 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.04□□□□□ -1.44
RFC3P40938 AC245052.7-201ENST00000601161 359 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.04□□□□□ -1.44
RFC3P40938 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 AC114477.1-201ENST00000605097 605 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AL359091.2-201ENST00000609303 556 ntBASIC6.04□□□□□ -1.44
RFC3P40938 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.04□□□□□ -1.44
RFC3P40938 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AL683826.1-201ENST00000624104 627 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC3P40938 AL136531.3-201ENST00000624378 3658 ntBASIC6.04□□□□□ -1.44
RFC3P40938 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC3P40938 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 UGT2B27P-201ENST00000505092 1620 ntBASIC6.03□□□□□ -1.44
RFC3P40938 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 CDY5P-201ENST00000411487 1580 ntBASIC6.03□□□□□ -1.44
RFC3P40938 CDY9P-201ENST00000451397 1580 ntBASIC6.03□□□□□ -1.44
RFC3P40938 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 OR56A4-201ENST00000330728 1209 ntBASIC6.03□□□□□ -1.44
RFC3P40938 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RFC3P40938 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 RNU1-84P-201ENST00000365447 164 ntBASIC6.03□□□□□ -1.44
RFC3P40938 RNA5SP279-201ENST00000365513 117 ntBASIC6.03□□□□□ -1.44
RFC3P40938 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 RN7SKP271-201ENST00000410528 320 ntBASIC6.03□□□□□ -1.44
RFC3P40938 RN7SKP296-201ENST00000411185 341 ntBASIC6.03□□□□□ -1.44
RFC3P40938 PSMC1P2-201ENST00000423961 1204 ntBASIC6.03□□□□□ -1.44
RFC3P40938 DUTP4-201ENST00000424782 475 ntBASIC6.03□□□□□ -1.44
RFC3P40938 RPS27P20-201ENST00000492051 246 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AC011352.2-201ENST00000514574 1016 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 AC124891.1-201ENST00000536322 519 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.03□□□□□ -1.44
RFC3P40938 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.03□□□□□ -1.44
RFC3P40938 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.03□□□□□ -1.44
RFC3P40938 MIR3154-201ENST00000577829 84 ntBASIC6.03□□□□□ -1.44
RFC3P40938 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 AL354718.1-201ENST00000619764 589 ntBASIC6.03□□□□□ -1.44
RFC3P40938 MIR6806-201ENST00000622141 64 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AC034229.6-201ENST00000623704 224 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 SNX18P10-201ENST00000625014 519 ntBASIC6.03□□□□□ -1.44
RFC3P40938 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFC3P40938 AL121936.2-201ENST00000641935 662 ntBASIC6.03□□□□□ -1.44
RFC3P40938 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RFC3P40938 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 MAPK10-287ENST00000641217 3037 ntBASIC6.03□□□□□ -1.44
RFC3P40938 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC3P40938 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC3P40938 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFC3P40938 Z97989.1-201ENST00000531702 2421 ntBASIC6.03□□□□□ -1.44
RFC3P40938 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
RFC3P40938 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
RFC3P40938 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC3P40938 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFC3P40938 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RFC3P40938 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFC3P40938 AC009831.5-201ENST00000624000 3189 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms