Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-311P-201ENST00000516224 102 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.37□□□□□ -1.07
ERCC3P19447 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AP001803.1-201ENST00000525668 147 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AC124891.1-201ENST00000536322 519 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.37□□□□□ -1.07
ERCC3P19447 CHEK2P2-201ENST00000554701 672 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.37□□□□□ -1.07
ERCC3P19447 RPSAP66-201ENST00000592196 606 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 VN1R9P-201ENST00000614184 867 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 AC026108.1-201ENST00000635444 547 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 CREM-216ENST00000429130 1476 ntTSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 AP000766.1-201ENST00000561746 4140 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 HSPD1P1-201ENST00000503199 1726 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 HSPD1P11-201ENST00000508643 1702 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
ERCC3P19447 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.37□□□□□ -1.07
ERCC3P19447 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ERCC3P19447 WNK1-220ENST00000574564 1401 ntBASIC8.37□□□□□ -1.07
ERCC3P19447 BX322650.1-201ENST00000332359 2143 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 OR10D1P-201ENST00000355343 936 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ERCC3P19447 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
ERCC3P19447 YWHAZP4-201ENST00000392459 708 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 PDCL3P5-201ENST00000398028 722 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 GAPDHP15-201ENST00000398586 975 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 NPM1P38-201ENST00000403835 865 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 TRIM60P5Y-201ENST00000413946 574 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC073900.1-201ENST00000429766 776 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.36□□□□□ -1.07
ERCC3P19447 FTLP17-201ENST00000432567 525 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 AC245047.5-201ENST00000437312 556 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC009237.4-201ENST00000441078 238 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.36□□□□□ -1.07
ERCC3P19447 HMGN1P32-201ENST00000441744 256 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL845321.1-201ENST00000444603 348 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC8.36□□□□□ -1.07
ERCC3P19447 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 LRRC37A14P-201ENST00000452297 462 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 PABPC1P10-201ENST00000464731 381 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 RN7SL836P-201ENST00000476140 296 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 RN7SL868P-201ENST00000485915 303 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 RN7SL655P-201ENST00000486087 298 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 RN7SL153P-201ENST00000486501 292 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 DUXAP5-201ENST00000529668 529 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC023538.1-201ENST00000534576 736 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.36□□□□□ -1.07
ERCC3P19447 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 AL135978.1-201ENST00000553618 1266 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.36□□□□□ -1.07
ERCC3P19447 pRNA.12-201ENST00000614353 90 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 pRNA.3-201ENST00000615048 90 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL355493.4-201ENST00000618530 292 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC006386.1-201ENST00000619436 415 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC022079.2-201ENST00000619739 566 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC025287.2-201ENST00000621911 668 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AL450226.2-201ENST00000622913 439 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 AC004777.1-201ENST00000624317 287 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
ERCC3P19447 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.36□□□□□ -1.07
ERCC3P19447 AC090132.1-201ENST00000524071 1480 ntBASIC8.36□□□□□ -1.07
ERCC3P19447 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms