Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RB1P06400 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7□□□□□ -1.29
RB1P06400 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7□□□□□ -1.29
RB1P06400 AC093225.1-201ENST00000506867 1408 ntBASIC7□□□□□ -1.29
RB1P06400 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
RB1P06400 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7□□□□□ -1.29
RB1P06400 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RB1P06400 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.99□□□□□ -1.29
RB1P06400 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RB1P06400 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RB1P06400 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.99□□□□□ -1.29
RB1P06400 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.99□□□□□ -1.29
RB1P06400 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 RNU6-167P-201ENST00000384292 106 ntBASIC6.99□□□□□ -1.29
RB1P06400 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 DHFRP2-201ENST00000414224 547 ntBASIC6.99□□□□□ -1.29
RB1P06400 CYP4F32P-201ENST00000426492 504 ntBASIC6.99□□□□□ -1.29
RB1P06400 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 IGLV3-4-201ENST00000432300 244 ntBASIC6.99□□□□□ -1.29
RB1P06400 AL391987.1-201ENST00000441025 200 ntBASIC6.99□□□□□ -1.29
RB1P06400 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 RPS10P20-201ENST00000494130 463 ntBASIC6.99□□□□□ -1.29
RB1P06400 RN7SL101P-201ENST00000496350 279 ntBASIC6.99□□□□□ -1.29
RB1P06400 MTCO3P42-201ENST00000509488 518 ntBASIC6.99□□□□□ -1.29
RB1P06400 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.99□□□□□ -1.29
RB1P06400 MTCO3P39-201ENST00000514812 518 ntBASIC6.99□□□□□ -1.29
RB1P06400 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.99□□□□□ -1.29
RB1P06400 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 AC115989.2-201ENST00000578640 563 ntBASIC6.99□□□□□ -1.29
RB1P06400 MIR4701-201ENST00000583094 63 ntBASIC6.99□□□□□ -1.29
RB1P06400 GTF2IP6-201ENST00000583143 541 ntBASIC6.99□□□□□ -1.29
RB1P06400 AC010463.3-201ENST00000594077 500 ntBASIC6.99□□□□□ -1.29
RB1P06400 AC010333.3-201ENST00000615100 402 ntBASIC6.99□□□□□ -1.29
RB1P06400 AC005277.2-201ENST00000617898 390 ntBASIC6.99□□□□□ -1.29
RB1P06400 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.99□□□□□ -1.29
RB1P06400 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.99□□□□□ -1.29
RB1P06400 AC087269.2-201ENST00000641764 975 ntBASIC6.99□□□□□ -1.29
RB1P06400 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.99□□□□□ -1.29
RB1P06400 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.99□□□□□ -1.29
RB1P06400 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.99□□□□□ -1.29
RB1P06400 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
RB1P06400 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.99□□□□□ -1.29
RB1P06400 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RB1P06400 AC022613.3-201ENST00000560740 1346 ntBASIC6.99□□□□□ -1.29
RB1P06400 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RB1P06400 AL391262.1-201ENST00000556558 1992 ntBASIC6.99□□□□□ -1.29
RB1P06400 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RB1P06400 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 AP000641.1-201ENST00000531988 1639 ntBASIC6.98□□□□□ -1.29
RB1P06400 AC122713.2-201ENST00000624942 3335 ntBASIC6.98□□□□□ -1.29
RB1P06400 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 RPL12P13-201ENST00000310055 497 ntBASIC6.98□□□□□ -1.29
RB1P06400 RNA5SP65-201ENST00000363166 119 ntBASIC6.98□□□□□ -1.29
RB1P06400 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RB1P06400 AC008171.1-201ENST00000395058 200 ntBASIC6.98□□□□□ -1.29
RB1P06400 RN7SKP271-201ENST00000410528 320 ntBASIC6.98□□□□□ -1.29
RB1P06400 SLC20A1P1-201ENST00000413906 956 ntBASIC6.98□□□□□ -1.29
RB1P06400 AC016769.2-201ENST00000414815 475 ntBASIC6.98□□□□□ -1.29
RB1P06400 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.98□□□□□ -1.29
RB1P06400 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 PPIAP27-201ENST00000453800 265 ntBASIC6.98□□□□□ -1.29
RB1P06400 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.98□□□□□ -1.29
RB1P06400 RPL12P30-201ENST00000488389 499 ntBASIC6.98□□□□□ -1.29
RB1P06400 AC106872.4-201ENST00000510050 523 ntBASIC6.98□□□□□ -1.29
RB1P06400 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.98□□□□□ -1.29
RB1P06400 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 SETP3-201ENST00000581726 813 ntBASIC6.98□□□□□ -1.29
RB1P06400 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms