Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CKS1BP61024 FXNP1-201ENST00000555153 337 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC4.6□□□□□ -1.67
CKS1BP61024 AC007494.1-201ENST00000562293 760 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC4.6□□□□□ -1.67
CKS1BP61024 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC4.6□□□□□ -1.67
CKS1BP61024 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC4.6□□□□□ -1.67
CKS1BP61024 AC007255.2-201ENST00000604053 631 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 RN7SL760P-201ENST00000607344 270 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CKS1BP61024 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC4.6□□□□□ -1.67
CKS1BP61024 C18orf12-201ENST00000623329 537 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 AL353608.4-201ENST00000624487 1188 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC4.6□□□□□ -1.67
CKS1BP61024 AC103703.1-201ENST00000634783 663 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 OR7E161P-202ENST00000641994 1033 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
CKS1BP61024 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CKS1BP61024 CDY11P-201ENST00000447168 1651 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CKS1BP61024 RPS2P45-201ENST00000469997 2057 ntBASIC4.6□□□□□ -1.67
CKS1BP61024 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CKS1BP61024 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CKS1BP61024 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CKS1BP61024 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CKS1BP61024 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CKS1BP61024 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 STAG3L4-201ENST00000352103 530 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 RNU2-18P-201ENST00000411224 162 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 CBX1P3-201ENST00000413296 527 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 SETP10-201ENST00000424368 814 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 TCEAL4P1-201ENST00000453620 588 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC010878.1-201ENST00000456500 1047 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CKS1BP61024 PSMA6P2-201ENST00000457574 686 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 RN7SL213P-201ENST00000463482 317 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 RN7SL608P-201ENST00000492377 279 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 RN7SL306P-201ENST00000492941 296 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC107956.2-201ENST00000496042 454 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC023424.1-201ENST00000496058 459 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 MTCO1P15-201ENST00000529569 1526 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.59□□□□□ -1.67
CKS1BP61024 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 OR4F28P-201ENST00000559128 938 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 AC090286.3-201ENST00000573133 187 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 OR4F8P-201ENST00000589943 937 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 AL022394.1-201ENST00000606979 292 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 RN7SL778P-201ENST00000607160 297 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC245407.2-201ENST00000614199 451 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC068234.2-201ENST00000619646 522 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.67
CKS1BP61024 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.59□□□□□ -1.67
CKS1BP61024 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
CKS1BP61024 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CKS1BP61024 MAPK10-328ENST00000641553 4009 ntBASIC4.59□□□□□ -1.68
CKS1BP61024 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CKS1BP61024 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CKS1BP61024 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CKS1BP61024 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CKS1BP61024 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CKS1BP61024 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms