Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC116165.3-201ENST00000614524 400 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 MIR6849-201ENST00000618543 69 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AP001264.1-201ENST00000620602 703 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC005514.1-201ENST00000623521 208 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC105235.1-201ENST00000623208 1816 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 PSMC1P6-201ENST00000477233 1319 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDH9Q9HC56 AC011455.2-201ENST00000599320 3336 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 MTCO1P46-201ENST00000451639 1491 ntBASIC6.73□□□□□ -1.33
PCDH9Q9HC56 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 SNORD8-201ENST00000363915 110 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 CDC42P6-201ENST00000421246 576 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 TVP23CP1-201ENST00000450317 639 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 RPL5P33-201ENST00000487833 905 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 MTCO3P42-201ENST00000509488 518 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 MTCO3P39-201ENST00000514812 518 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 PPIAP14-201ENST00000577627 496 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC233702.7-202ENST00000582941 211 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 AL157831.2-201ENST00000564681 3095 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.72□□□□□ -1.33
PCDH9Q9HC56 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDH9Q9HC56 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDH9Q9HC56 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDH9Q9HC56 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.71□□□□□ -1.33
PCDH9Q9HC56 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDH9Q9HC56 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDH9Q9HC56 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC019178.1-201ENST00000392337 440 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC026310.1-201ENST00000396004 378 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL929472.1-201ENST00000417484 429 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC006509.1-201ENST00000420788 634 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC003989.1-201ENST00000434569 565 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC009237.1-201ENST00000442127 744 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 VN1R38P-201ENST00000450265 887 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 NPM1P9-201ENST00000453156 844 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 RPL31P11-202ENST00000454082 372 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC091965.3-201ENST00000506236 208 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC008429.2-201ENST00000523057 864 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDH9Q9HC56 OR4C49P-201ENST00000563891 900 ntBASIC6.71□□□□□ -1.34
PCDH9Q9HC56 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms