Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AL139135.1-201ENST00000412675 209 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 MTND2P25-201ENST00000449028 610 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 MTND5P8-201ENST00000449817 1083 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 SNORA35.1-201ENST00000458908 128 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 RN7SL259P-201ENST00000478499 253 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 RPL7AP30-201ENST00000482859 796 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC105391.1-201ENST00000503155 1045 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 RN7SKP67-201ENST00000515905 235 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 SCARNA1-201ENST00000517138 166 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 OR4C1P-201ENST00000530880 937 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 ACTG1P15-201ENST00000570019 1063 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC245884.10-201ENST00000597355 337 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 PTCHD3P1-201ENST00000612350 537 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 MIR6774-201ENST00000614651 70 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 MIR6883-201ENST00000614952 78 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AC010872.1-201ENST00000624225 675 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 HSPA8P19-201ENST00000505359 1517 ntBASIC6.28□□□□□ -1.4
SNX18Q96RF0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SNX18Q96RF0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.28□□□□□ -1.4
SNX18Q96RF0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.27□□□□□ -1.4
SNX18Q96RF0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SNX18Q96RF0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 MIR541-201ENST00000401360 84 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC245884.2-201ENST00000426257 404 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 MTND4LP14-201ENST00000429447 288 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 CYCSP44-201ENST00000448560 313 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 OR52Y1P-201ENST00000452418 828 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 RPS4XP19-201ENST00000460237 736 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 RN7SL776P-201ENST00000493390 268 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 SCARNA6-201ENST00000515982 265 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 RNA5SP96-201ENST00000516041 107 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 IGKV2-19-201ENST00000518132 283 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC090286.3-201ENST00000573133 187 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC068313.1-201ENST00000604028 1008 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC113361.1-201ENST00000606683 543 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 AC097372.4-201ENST00000625025 466 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 AP001153.1-201ENST00000641024 338 ntBASIC6.27□□□□□ -1.41
SNX18Q96RF0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.27□□□□□ -1.41
SNX18Q96RF0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SNX18Q96RF0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms