Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.59□□□□□ -1.03
HLA-CQ95604 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.04
HLA-CQ95604 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
HLA-CQ95604 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.04
HLA-CQ95604 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ATP5BP1-201ENST00000411980 1574 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 IFIT1P1-201ENST00000400497 1449 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HLA-CQ95604 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC010132.2-201ENST00000295493 1043 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 RNU6-501P-201ENST00000364072 100 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HLA-CQ95604 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 SNORA51.7-201ENST00000384171 134 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 RNA5SP35-201ENST00000391257 129 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 PIGPP2-201ENST00000411569 458 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.58□□□□□ -1.04
HLA-CQ95604 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC104850.1-201ENST00000435940 476 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC239798.1-201ENST00000449024 1176 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC022730.1-201ENST00000473114 568 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HLA-CQ95604 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 RNF138P1-201ENST00000502765 546 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC122718.2-201ENST00000505325 591 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 ATP5J2P4-201ENST00000538774 267 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC8.58□□□□□ -1.04
HLA-CQ95604 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AP001017.1-201ENST00000591378 482 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC024023.1-201ENST00000624530 922 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC241585.4-201ENST00000640951 686 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 AC117945.2-201ENST00000642109 1521 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 SEC63P2-201ENST00000503863 1939 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-CQ95604 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
HLA-CQ95604 PABPC1P9-201ENST00000426076 1612 ntBASIC8.58□□□□□ -1.04
HLA-CQ95604 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-CQ95604 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-CQ95604 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 C11orf57-209ENST00000532163 3739 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-CQ95604 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 AP005060.1-201ENST00000623868 3174 ntBASIC8.57□□□□□ -1.04
HLA-CQ95604 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HLA-CQ95604 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-CQ95604 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-CQ95604 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-CQ95604 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms