Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NEK3P51956 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 ST13P16-201ENST00000401760 781 ntBASIC7.04□□□□□ -1.28
NEK3P51956 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 SETP10-201ENST00000424368 814 ntBASIC7.04□□□□□ -1.28
NEK3P51956 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 SEPT14P12-201ENST00000442280 560 ntBASIC7.04□□□□□ -1.28
NEK3P51956 MTND6P5-201ENST00000448266 512 ntBASIC7.04□□□□□ -1.28
NEK3P51956 AC010878.1-201ENST00000456500 1047 ntBASIC7.04□□□□□ -1.28
NEK3P51956 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 RNU6-467P-201ENST00000517027 110 ntBASIC7.04□□□□□ -1.28
NEK3P51956 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 IGLVV-66-201ENST00000523818 341 ntBASIC7.04□□□□□ -1.28
NEK3P51956 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 AC008126.1-201ENST00000549019 480 ntBASIC7.04□□□□□ -1.28
NEK3P51956 AL591767.3-201ENST00000554632 525 ntBASIC7.04□□□□□ -1.28
NEK3P51956 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.04□□□□□ -1.28
NEK3P51956 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NEK3P51956 FO082842.1-201ENST00000423552 1370 ntBASIC7.04□□□□□ -1.28
NEK3P51956 AP005139.1-201ENST00000580702 1647 ntBASIC7.04□□□□□ -1.28
NEK3P51956 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NEK3P51956 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.04□□□□□ -1.28
NEK3P51956 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 AC110597.1-201ENST00000562669 3176 ntBASIC7.04□□□□□ -1.28
NEK3P51956 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NEK3P51956 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.03□□□□□ -1.28
NEK3P51956 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
NEK3P51956 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.03□□□□□ -1.28
NEK3P51956 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 AC102941.1-201ENST00000567616 1537 ntBASIC7.03□□□□□ -1.28
NEK3P51956 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NEK3P51956 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 RNU4-39P-201ENST00000362455 127 ntBASIC7.03□□□□□ -1.28
NEK3P51956 SNORA27.3-201ENST00000364937 134 ntBASIC7.03□□□□□ -1.28
NEK3P51956 RNA5SP172-201ENST00000365061 118 ntBASIC7.03□□□□□ -1.28
NEK3P51956 RNA5SP176-201ENST00000390956 110 ntBASIC7.03□□□□□ -1.28
NEK3P51956 RN7SKP148-201ENST00000410179 275 ntBASIC7.03□□□□□ -1.28
NEK3P51956 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AL034379.1-201ENST00000423216 253 ntBASIC7.03□□□□□ -1.28
NEK3P51956 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AC012497.1-201ENST00000429392 575 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC018804.1-201ENST00000430381 618 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.03□□□□□ -1.28
NEK3P51956 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AL096803.1-201ENST00000456921 1021 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AC115223.1-201ENST00000466377 870 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AP000805.1-201ENST00000471604 784 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms