Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC073072.2-201ENST00000447425 348 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 CEACAMP5-201ENST00000448037 961 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 RN7SL149P-201ENST00000465197 281 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC090589.1-201ENST00000473109 362 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC112225.1-201ENST00000508230 297 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 SUMO2P7-201ENST00000511179 285 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 RNU2-45P-201ENST00000516068 187 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 RNA5SP75-201ENST00000516841 111 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 SCARNA18.2-201ENST00000516882 84 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC021451.1-201ENST00000523498 1129 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 GTF2IP11-201ENST00000526931 420 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC103855.4-201ENST00000533158 265 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 PDCL3P1-201ENST00000534575 734 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC005000.1-201ENST00000536192 288 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC087894.1-201ENST00000538359 518 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC090888.2-201ENST00000559765 1144 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 RN7SL689P-201ENST00000577215 297 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AP001357.1-201ENST00000586304 1053 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 BNIP3P24-201ENST00000593398 557 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC004775.1-201ENST00000607389 753 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AL669942.2-201ENST00000620352 697 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC007204.1-201ENST00000621794 555 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC007347.2-201ENST00000623044 180 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 AC243725.1-201ENST00000637164 436 ntBASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PPARGC1AQ9UBK2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC016251.2-201ENST00000623393 3089 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC067942.1-201ENST00000488045 1493 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 MIR640-201ENST00000385086 96 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL161742.1-201ENST00000418154 584 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 RNF19BPX-201ENST00000426224 625 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 FTLP17-201ENST00000432567 525 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 CLNS1AP1-201ENST00000435954 682 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 MTCYBP31-201ENST00000438855 1122 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL390879.1-201ENST00000439143 386 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC239800.1-201ENST00000442049 719 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 RPL7P33-201ENST00000444159 742 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC005517.1-201ENST00000452091 489 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 SRP68P2-201ENST00000456184 254 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 SNORD11.1-201ENST00000459482 85 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC096992.1-201ENST00000459808 709 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 RPSAP48-201ENST00000466509 889 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 CBX5P1-201ENST00000468470 561 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 OR2A3P-201ENST00000493774 953 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC112184.1-201ENST00000505179 312 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC093720.1-201ENST00000505681 714 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 RPL7L1P7-201ENST00000509986 724 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 AC111000.6-201ENST00000514471 709 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 SCARNA6-201ENST00000515982 265 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 IGKV1D-32-201ENST00000517449 318 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 SEC11B-201ENST00000518383 499 ntBASIC7.31□□□□□ -1.24
PPARGC1AQ9UBK2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms