Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DMBP28068 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DMBP28068 RN7SKP118-201ENST00000364331 330 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AL451142.1-201ENST00000375867 775 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 RN7SKP296-201ENST00000411185 341 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DMBP28068 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 RPL3P11-201ENST00000434028 1146 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 PSMD8P1-201ENST00000436275 769 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 UBQLN1P1-207ENST00000441056 1169 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AL845321.1-201ENST00000444603 348 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5□□□□□ -1.61
HLA-DMBP28068 RPS4XP17-201ENST00000479057 754 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC092824.1-201ENST00000483524 576 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC021146.11-201ENST00000503319 491 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC083906.1-201ENST00000509298 406 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC091849.1-201ENST00000509920 121 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 AP003080.1-202ENST00000526526 915 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 CHEK2P2-201ENST00000554701 672 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DMBP28068 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5□□□□□ -1.61
HLA-DMBP28068 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 MIR378C-201ENST00000578683 81 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 AL049840.5-201ENST00000602827 552 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 BUB1P1-201ENST00000603541 607 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AL356986.1-201ENST00000604085 341 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 MRPL57P1-201ENST00000621486 265 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 AC005858.3-201ENST00000624756 589 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-DMBP28068 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-DMBP28068 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 AL731556.1-201ENST00000394628 3711 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5□□□□□ -1.61
HLA-DMBP28068 DPY19L1P1-201ENST00000417811 2594 ntBASIC5□□□□□ -1.61
HLA-DMBP28068 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5□□□□□ -1.61
HLA-DMBP28068 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-DMBP28068 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMBP28068 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC023245.2-201ENST00000530760 2978 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMBP28068 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMBP28068 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMBP28068 FAM32BP-201ENST00000344033 333 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 RN7SKP184-201ENST00000362348 333 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 LDHAP5-201ENST00000394996 622 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 NME1P1-201ENST00000420914 382 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 Z68868.1-201ENST00000429048 544 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 RPSAP24-201ENST00000461543 873 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 RPL23AP64-201ENST00000469465 435 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 KCTD9P4-201ENST00000526766 1166 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC023310.2-201ENST00000553844 547 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC005479.3-201ENST00000602790 431 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 AC005899.6-201ENST00000620729 297 ntBASIC4.99□□□□□ -1.61
HLA-DMBP28068 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms