Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AL022324.2-201ENST00000434827 780 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC063955.1-201ENST00000462872 685 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 RN7SL790P-201ENST00000474043 298 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 RPS4XP17-201ENST00000479057 754 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 RN7SL654P-201ENST00000479178 292 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC026826.1-201ENST00000493002 361 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 RN7SL143P-201ENST00000496780 297 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC093878.1-201ENST00000515630 432 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 SNORA26.10-201ENST00000516427 141 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC131935.1-201ENST00000524621 333 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 MIR4310-201ENST00000582950 57 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 RPS4XP21-201ENST00000603814 750 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC004908.1-201ENST00000606572 541 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC009779.8-202ENST00000607990 932 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC253576.2-201ENST00000618815 580 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC021766.1-201ENST00000624404 741 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC135068.11-201ENST00000636378 921 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC138915.4-201ENST00000565549 4147 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
DKK3Q9UBP4 AC020658.2-201ENST00000559030 4020 ntBASIC6.92□□□□□ -1.3
DKK3Q9UBP4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 Y_RNA.110-201ENST00000363220 99 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC017078.1-201ENST00000416146 368 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC019084.1-201ENST00000457337 432 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC083806.1-201ENST00000468934 316 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 RN7SL836P-201ENST00000476140 296 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 MINOS1P4-201ENST00000515470 318 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC087752.2-201ENST00000521219 281 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC110056.1-201ENST00000525759 911 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC068408.1-201ENST00000577406 1144 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC087575.1-201ENST00000585087 229 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 DIMT1P1-201ENST00000603970 763 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 CYCSP1-201ENST00000604815 315 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AL035410.2-201ENST00000604963 864 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 MIR6780B-201ENST00000610307 79 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms