Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 FTLP19-201ENST00000433300 394 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 CTSLP6-201ENST00000458273 1002 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 ADAM3B-201ENST00000569937 840 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 OR7E19P-202ENST00000589942 844 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 QTRT1P1-201ENST00000604344 1078 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AC073263.3-201ENST00000624449 858 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 TMCC1P1-201ENST00000518897 1980 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 AL139384.2-201ENST00000613809 3590 ntBASIC6.54□□□□□ -1.36
VMP1Q96GC9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.54□□□□□ -1.36
VMP1Q96GC9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
VMP1Q96GC9 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC011416.1-201ENST00000514947 1732 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 CDC27P2-201ENST00000425026 1922 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 RNA5SP333-201ENST00000363466 118 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 RNA5SP334-201ENST00000364825 118 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 RNA5SP172-201ENST00000365061 118 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AL590762.1-201ENST00000391782 432 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 EEF1GP6-201ENST00000402309 905 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 MYL6P3-201ENST00000436904 432 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC027124.1-201ENST00000440852 466 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 RN7SL868P-201ENST00000485915 303 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AP001960.1-201ENST00000506494 658 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 CARSP2-201ENST00000520688 277 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AL135978.1-201ENST00000553618 1266 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC023827.2-201ENST00000566880 1061 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 MIR5010-201ENST00000582846 120 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 SIGLEC31P-201ENST00000594237 551 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 SNORA35B-201ENST00000607417 129 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 PTCHD3P1-201ENST00000612350 537 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC116165.3-201ENST00000614524 400 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VMP1Q96GC9 AC022905.1-201ENST00000503430 3048 ntBASIC6.53□□□□□ -1.36
VMP1Q96GC9 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.53□□□□□ -1.36
VMP1Q96GC9 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms