Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.34□□□□□ -1.39
SUMO3P55854 EIF4A3P1-201ENST00000578499 647 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 SNORA70D-201ENST00000578836 135 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.34□□□□□ -1.39
SUMO3P55854 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SUMO3P55854 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SUMO3P55854 AL158050.2-201ENST00000605336 568 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.34□□□□□ -1.39
SUMO3P55854 MIR8084-201ENST00000614105 89 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AP005212.3-201ENST00000619964 528 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AL445528.2-201ENST00000620582 470 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AC103564.3-201ENST00000621194 220 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AC034229.6-201ENST00000623704 224 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AC008626.2-201ENST00000624425 248 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 AL445984.1-201ENST00000637834 659 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SUMO3P55854 CDY19P-201ENST00000411668 1613 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 CDY18P-201ENST00000438294 1609 ntBASIC6.34□□□□□ -1.39
SUMO3P55854 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.34□□□□□ -1.39
SUMO3P55854 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.34□□□□□ -1.39
SUMO3P55854 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SUMO3P55854 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.34□□□□□ -1.39
SUMO3P55854 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.34□□□□□ -1.39
SUMO3P55854 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.34□□□□□ -1.39
SUMO3P55854 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.34□□□□□ -1.39
SUMO3P55854 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SUMO3P55854 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SUMO3P55854 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.34□□□□□ -1.39
SUMO3P55854 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SUMO3P55854 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.34□□□□□ -1.4
SUMO3P55854 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SUMO3P55854 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.34□□□□□ -1.4
SUMO3P55854 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
SUMO3P55854 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.34□□□□□ -1.4
SUMO3P55854 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SUMO3P55854 AC092111.2-201ENST00000611627 1414 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AL359396.1-201ENST00000623151 2376 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC093844.1-201ENST00000514910 1361 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 AC020658.2-201ENST00000559030 4020 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 RNA5SP302-201ENST00000364896 100 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 OR13C3-201ENST00000374781 1108 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.33□□□□□ -1.4
SUMO3P55854 RNU6-1257P-201ENST00000384625 110 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SUMO3P55854 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 RN7SKP148-201ENST00000410179 275 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 DSTNP5-201ENST00000427921 523 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 PUDPP2-201ENST00000431423 643 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC091390.2-201ENST00000432573 374 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 MTATP6P14-201ENST00000455189 673 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 MED28P7-201ENST00000456611 530 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AP000805.1-201ENST00000471604 784 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 RNA5SP318-201ENST00000516352 92 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 OR4A17P-201ENST00000526032 904 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 NXPE2P1-201ENST00000543705 726 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC126323.4-201ENST00000566935 234 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 MRPS21P9-201ENST00000571150 257 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC011447.2-201ENST00000592921 283 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SUMO3P55854 BMS1P7-201ENST00000602440 1052 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AC004477.3-201ENST00000614061 590 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC091046.2-201ENST00000620775 665 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 AC007347.2-201ENST00000623044 180 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.33□□□□□ -1.4
SUMO3P55854 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC063952.1-203ENST00000634410 658 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SUMO3P55854 AC087269.2-201ENST00000641764 975 ntBASIC6.33□□□□□ -1.4
SUMO3P55854 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.33□□□□□ -1.4
SUMO3P55854 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms