Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC120057.5-201ENST00000623840 154 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NR1H2P55055 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 HSPD1P8-201ENST00000400121 1658 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 AC087565.3-202ENST00000642085 1603 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 AC027279.1-201ENST00000568885 4284 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NR1H2P55055 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.48□□□□□ -1.37
NR1H2P55055 OR2M1P-201ENST00000318104 951 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 RNA5SP302-201ENST00000364896 100 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 U3.14-201ENST00000365363 227 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
NR1H2P55055 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NR1H2P55055 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NR1H2P55055 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 CDY17P-201ENST00000414121 1282 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC091492.1-201ENST00000419844 272 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 CDY8P-201ENST00000428380 1279 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.48□□□□□ -1.37
NR1H2P55055 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 RPS10P14-201ENST00000440748 502 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 CDY20P-201ENST00000447528 1279 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 MTND3P4-201ENST00000453537 303 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 PSPC1P2-201ENST00000455130 225 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 RPL34P34-201ENST00000465389 354 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 CBX5P1-201ENST00000468470 561 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC005017.1-201ENST00000482002 490 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.48□□□□□ -1.37
NR1H2P55055 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.48□□□□□ -1.37
NR1H2P55055 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.48□□□□□ -1.37
NR1H2P55055 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.48□□□□□ -1.37
NR1H2P55055 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NR1H2P55055 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.48□□□□□ -1.37
NR1H2P55055 RPS7P1-201ENST00000571702 585 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 AC061975.3-201ENST00000583209 244 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 AC023513.1-201ENST00000604396 691 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NR1H2P55055 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 AP003108.4-201ENST00000623917 878 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 OR8A1-204ENST00000642111 1145 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
NR1H2P55055 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 OR10AB1P-202ENST00000641219 1686 ntBASIC6.48□□□□□ -1.37
NR1H2P55055 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NR1H2P55055 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NR1H2P55055 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NR1H2P55055 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
NR1H2P55055 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.47□□□□□ -1.37
NR1H2P55055 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.47□□□□□ -1.37
NR1H2P55055 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 MTCO1P28-201ENST00000574177 1528 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NR1H2P55055 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NR1H2P55055 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.47□□□□□ -1.37
NR1H2P55055 AL353625.1-202ENST00000366273 571 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 SSX6-201ENST00000376932 562 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 SOD1P1-201ENST00000407803 440 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.47□□□□□ -1.37
NR1H2P55055 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.47□□□□□ -1.37
NR1H2P55055 PPIAP23-201ENST00000420099 497 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 EEF1GP7-201ENST00000422983 703 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 AKR1B10P1-201ENST00000425765 942 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 RPL14P5-201ENST00000436474 730 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 AL138787.1-202ENST00000437804 898 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 OSTCP2-201ENST00000437956 444 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.47□□□□□ -1.37
NR1H2P55055 AC114878.1-201ENST00000441166 358 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.47□□□□□ -1.37
NR1H2P55055 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.47□□□□□ -1.37
NR1H2P55055 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.47□□□□□ -1.37
NR1H2P55055 MTND6P5-201ENST00000448266 512 ntBASIC6.47□□□□□ -1.37
NR1H2P55055 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms