Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
SCN4AP35499 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 RNA5SP132-201ENST00000364725 118 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.62□□□□□ -1.19
SCN4AP35499 GAPDHP75-201ENST00000433910 943 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.62□□□□□ -1.19
SCN4AP35499 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.62□□□□□ -1.19
SCN4AP35499 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 ZNF322P1-201ENST00000568013 1209 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 RBPJP7-201ENST00000442803 1447 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 RBPJP5-201ENST00000449433 1447 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 AC106872.5-201ENST00000508856 1416 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SCN4AP35499 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.62□□□□□ -1.19
SCN4AP35499 AL096711.1-201ENST00000404780 554 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.62□□□□□ -1.19
SCN4AP35499 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.62□□□□□ -1.19
SCN4AP35499 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCN4AP35499 RN7SL834P-201ENST00000461450 286 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 AC108043.1-201ENST00000512696 574 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 BUB1P1-201ENST00000603541 607 ntBASIC7.62□□□□□ -1.19
SCN4AP35499 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.62□□□□□ -1.19
SCN4AP35499 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCN4AP35499 AP000866.6-201ENST00000638898 3579 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SCN4AP35499 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
SCN4AP35499 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCN4AP35499 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.61□□□□□ -1.19
SCN4AP35499 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN4AP35499 AL035660.1-201ENST00000422041 222 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN4AP35499 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.61□□□□□ -1.19
SCN4AP35499 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 COPS8P2-201ENST00000473228 627 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 AC122713.1-201ENST00000518368 1015 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 MIR6809-201ENST00000612189 116 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
SCN4AP35499 AC245014.3-201ENST00000618589 347 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 AC116667.2-201ENST00000641075 823 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 HCG18-244ENST00000602516 2890 ntBASIC7.61□□□□□ -1.19
SCN4AP35499 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.61□□□□□ -1.19
SCN4AP35499 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCN4AP35499 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.61□□□□□ -1.19
SCN4AP35499 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCN4AP35499 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN4AP35499 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.6□□□□□ -1.19
SCN4AP35499 Z83820.1-201ENST00000456978 1499 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN4AP35499 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.6□□□□□ -1.19
SCN4AP35499 SNORD16-201ENST00000362803 99 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 RNA5SP500-201ENST00000364486 119 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SCN4AP35499 RN7SKP216-201ENST00000411050 312 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SCN4AP35499 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.6□□□□□ -1.19
SCN4AP35499 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.6□□□□□ -1.19
SCN4AP35499 AC093270.2-201ENST00000486157 792 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.6□□□□□ -1.19
SCN4AP35499 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SCN4AP35499 AC005332.4-201ENST00000592752 579 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 AC092944.2-201ENST00000605443 889 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 MIR6793-201ENST00000612376 63 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 Z82209.2-201ENST00000623410 2012 ntBASIC7.6□□□□□ -1.19
SCN4AP35499 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SCN4AP35499 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.6□□□□□ -1.19
SCN4AP35499 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms