Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH3P22223 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 ARGFXP2-201ENST00000579304 949 ntBASIC6.57□□□□□ -1.36
CDH3P22223 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH3P22223 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CDH3P22223 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH3P22223 FO082842.1-201ENST00000423552 1370 ntBASIC6.57□□□□□ -1.36
CDH3P22223 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 AC099654.3-201ENST00000447087 1546 ntBASIC6.56□□□□□ -1.36
CDH3P22223 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH3P22223 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH3P22223 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH3P22223 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH3P22223 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 PAICSP2-201ENST00000429118 1150 ntBASIC6.56□□□□□ -1.36
CDH3P22223 LDHAP2-201ENST00000437325 985 ntBASIC6.56□□□□□ -1.36
CDH3P22223 H3F3BP1-201ENST00000440551 403 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 SNRPBP1-201ENST00000443634 282 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CDH3P22223 AC026774.2-201ENST00000513990 1098 ntBASIC6.56□□□□□ -1.36
CDH3P22223 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 NATP-201ENST00000523491 878 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 AP006587.5-201ENST00000532033 739 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 OR4C49P-201ENST00000563891 900 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 AL590032.1-201ENST00000604920 252 ntBASIC6.56□□□□□ -1.36
CDH3P22223 AL035410.2-201ENST00000604963 864 ntBASIC6.56□□□□□ -1.36
CDH3P22223 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 AC048341.3-201ENST00000619323 491 ntBASIC6.56□□□□□ -1.36
CDH3P22223 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH3P22223 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH3P22223 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 ZNF806-201ENST00000438300 1774 ntBASIC6.56□□□□□ -1.36
CDH3P22223 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH3P22223 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH3P22223 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 SAMMSON-210ENST00000641260 1308 ntBASIC6.55□□□□□ -1.36
CDH3P22223 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH3P22223 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
CDH3P22223 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.55□□□□□ -1.36
CDH3P22223 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH3P22223 RNA5SP474-201ENST00000391234 90 ntBASIC6.55□□□□□ -1.36
CDH3P22223 RNA5SP155-201ENST00000411154 129 ntBASIC6.55□□□□□ -1.36
CDH3P22223 AL353626.3-201ENST00000413399 657 ntBASIC6.55□□□□□ -1.36
CDH3P22223 SPATA20P1-201ENST00000423089 438 ntBASIC6.55□□□□□ -1.36
CDH3P22223 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 GAPDHP20-201ENST00000444107 1007 ntBASIC6.55□□□□□ -1.36
CDH3P22223 RPL23AP28-201ENST00000448062 470 ntBASIC6.55□□□□□ -1.36
CDH3P22223 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 RPS7P11-201ENST00000484240 586 ntBASIC6.55□□□□□ -1.36
CDH3P22223 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH3P22223 SNRPCP6-201ENST00000528310 210 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms