Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chmp1aQ921W0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp1aQ921W0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp1aQ921W0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Gm10418-201ENSMUST00000100943 576 ntBASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp1aQ921W0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp1aQ921W0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp1aQ921W0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms