Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Phox2aQ62066 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Phox2aQ62066 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Phox2aQ62066 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Phox2aQ62066 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Phox2aQ62066 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.19□□□□□ -0.14
Phox2aQ62066 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Phox2aQ62066 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Phox2aQ62066 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Phox2aQ62066 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Gm27801-201ENSMUST00000184174 223 ntBASIC14.18□□□□□ -0.14
Phox2aQ62066 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Phox2aQ62066 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Phox2aQ62066 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Phox2aQ62066 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Phox2aQ62066 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.16□□□□□ -0.14
Phox2aQ62066 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Phox2aQ62066 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Phox2aQ62066 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Phox2aQ62066 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms