Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Trim43cP86449 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43cP86449 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.61■□□□□ 0.57
Trim43cP86449 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim43cP86449 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim43cP86449 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim43cP86449 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim43cP86449 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim43cP86449 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim43cP86449 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim43cP86449 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43cP86449 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim43cP86449 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim43cP86449 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.59■□□□□ 0.57
Trim43cP86449 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim43cP86449 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim43cP86449 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim43cP86449 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Gm5417-201ENSMUST00000079706 384 ntBASIC18.59■□□□□ 0.57
Trim43cP86449 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim43cP86449 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trim43cP86449 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim43cP86449 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim43cP86449 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43cP86449 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43cP86449 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim43cP86449 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43cP86449 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim43cP86449 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Trim43cP86449 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim43cP86449 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.57■□□□□ 0.56
Trim43cP86449 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43cP86449 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim43cP86449 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim43cP86449 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim43cP86449 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.56■□□□□ 0.56
Trim43cP86449 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.56■□□□□ 0.56
Trim43cP86449 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim43cP86449 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim43cP86449 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim43cP86449 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim43cP86449 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim43cP86449 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim43cP86449 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim43cP86449 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms