Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Tpm2P58774 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.66■□□□□ 0.74
Tpm2P58774 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.66■□□□□ 0.74
Tpm2P58774 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.66■□□□□ 0.74
Tpm2P58774 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tpm2P58774 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Tpm2P58774 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tpm2P58774 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tpm2P58774 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tpm2P58774 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tpm2P58774 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm2P58774 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpm2P58774 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tpm2P58774 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.64■□□□□ 0.73
Tpm2P58774 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Tpm2P58774 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tpm2P58774 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tpm2P58774 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm2P58774 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tpm2P58774 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Tpm2P58774 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tpm2P58774 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tpm2P58774 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tpm2P58774 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm2P58774 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tpm2P58774 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.62■□□□□ 0.73
Tpm2P58774 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm2P58774 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tpm2P58774 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tpm2P58774 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.61■□□□□ 0.73
Tpm2P58774 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.61■□□□□ 0.73
Tpm2P58774 Gm42642-201ENSMUST00000200683 355 ntBASIC19.61■□□□□ 0.73
Tpm2P58774 Gm10033-202ENSMUST00000211874 928 ntBASIC19.61■□□□□ 0.73
Tpm2P58774 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Tpm2P58774 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm2P58774 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm2P58774 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.6■□□□□ 0.73
Tpm2P58774 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tpm2P58774 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.6■□□□□ 0.73
Tpm2P58774 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.6■□□□□ 0.73
Tpm2P58774 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms