Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.04□□□□□ -0.16
PmchP56942 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PmchP56942 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PmchP56942 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PmchP56942 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.03□□□□□ -0.16
PmchP56942 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PmchP56942 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Dancr-204ENSMUST00000132389 2347 ntBASIC14.03□□□□□ -0.16
PmchP56942 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PmchP56942 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PmchP56942 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PmchP56942 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PmchP56942 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.02□□□□□ -0.17
PmchP56942 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PmchP56942 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PmchP56942 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.01□□□□□ -0.17
PmchP56942 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PmchP56942 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PmchP56942 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PmchP56942 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PmchP56942 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14□□□□□ -0.17
PmchP56942 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Ap3s1-204ENSMUST00000225520 957 ntBASIC14□□□□□ -0.17
PmchP56942 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14□□□□□ -0.17
PmchP56942 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PmchP56942 Gm26917-202ENSMUST00000192833 3329 ntBASIC14□□□□□ -0.17
PmchP56942 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PmchP56942 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms