Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sssca1P56873 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sssca1P56873 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sssca1P56873 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sssca1P56873 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sssca1P56873 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sssca1P56873 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sssca1P56873 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.85□□□□□ -0.19
Sssca1P56873 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.85□□□□□ -0.19
Sssca1P56873 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.85□□□□□ -0.19
Sssca1P56873 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.85□□□□□ -0.19
Sssca1P56873 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sssca1P56873 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.85□□□□□ -0.19
Sssca1P56873 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sssca1P56873 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.85□□□□□ -0.19
Sssca1P56873 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sssca1P56873 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.85□□□□□ -0.19
Sssca1P56873 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sssca1P56873 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sssca1P56873 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sssca1P56873 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.84□□□□□ -0.19
Sssca1P56873 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sssca1P56873 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.84□□□□□ -0.19
Sssca1P56873 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Sssca1P56873 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Mir2861-201ENSMUST00000175539 82 ntBASIC13.84□□□□□ -0.19
Sssca1P56873 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.84□□□□□ -0.19
Sssca1P56873 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sssca1P56873 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sssca1P56873 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sssca1P56873 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.84□□□□□ -0.19
Sssca1P56873 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sssca1P56873 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sssca1P56873 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sssca1P56873 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sssca1P56873 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sssca1P56873 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.83□□□□□ -0.19
Sssca1P56873 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Gm13401-201ENSMUST00000117074 291 ntBASIC13.83□□□□□ -0.2
Sssca1P56873 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.83□□□□□ -0.2
Sssca1P56873 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sssca1P56873 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sssca1P56873 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sssca1P56873 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sssca1P56873 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms