Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sdc2P43407 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.21■□□□□ 0.67
Sdc2P43407 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc2P43407 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Sdc2P43407 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.2■□□□□ 0.66
Sdc2P43407 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.2■□□□□ 0.66
Sdc2P43407 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.2■□□□□ 0.66
Sdc2P43407 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sdc2P43407 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Sdc2P43407 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc2P43407 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Sdc2P43407 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sdc2P43407 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
Sdc2P43407 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.19■□□□□ 0.66
Sdc2P43407 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc2P43407 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.18■□□□□ 0.66
Sdc2P43407 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sdc2P43407 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sdc2P43407 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.18■□□□□ 0.66
Sdc2P43407 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc2P43407 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.18■□□□□ 0.66
Sdc2P43407 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Gm12382-201ENSMUST00000122005 922 ntBASIC19.17■□□□□ 0.66
Sdc2P43407 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.17■□□□□ 0.66
Sdc2P43407 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.17■□□□□ 0.66
Sdc2P43407 Gm4974-201ENSMUST00000209974 875 ntBASIC19.17■□□□□ 0.66
Sdc2P43407 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.17■□□□□ 0.66
Sdc2P43407 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sdc2P43407 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.17■□□□□ 0.66
Sdc2P43407 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sdc2P43407 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc2P43407 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.16■□□□□ 0.66
Sdc2P43407 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.16■□□□□ 0.66
Sdc2P43407 Gm18666-201ENSMUST00000190039 958 ntBASIC19.16■□□□□ 0.66
Sdc2P43407 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sdc2P43407 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc2P43407 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.16■□□□□ 0.66
Sdc2P43407 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sdc2P43407 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc2P43407 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.15■□□□□ 0.66
Sdc2P43407 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sdc2P43407 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms