Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cxcl1P12850 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.19□□□□□ -0.14
Cxcl1P12850 Rab3c-203ENSMUST00000224180 967 ntBASIC14.19□□□□□ -0.14
Cxcl1P12850 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.19□□□□□ -0.14
Cxcl1P12850 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl1P12850 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.18□□□□□ -0.14
Cxcl1P12850 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl1P12850 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cxcl1P12850 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Gm10849-201ENSMUST00000100397 618 ntBASIC14.17□□□□□ -0.14
Cxcl1P12850 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cxcl1P12850 Gm13148-201ENSMUST00000118892 745 ntBASIC14.17□□□□□ -0.14
Cxcl1P12850 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Gm6576-201ENSMUST00000169678 883 ntBASIC14.17□□□□□ -0.14
Cxcl1P12850 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.17□□□□□ -0.14
Cxcl1P12850 Gm10138-203ENSMUST00000206952 366 ntBASIC14.17□□□□□ -0.14
Cxcl1P12850 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cxcl1P12850 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl1P12850 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl1P12850 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cxcl1P12850 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cxcl1P12850 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.16□□□□□ -0.14
Cxcl1P12850 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl1P12850 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl1P12850 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl1P12850 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl1P12850 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.15□□□□□ -0.14
Cxcl1P12850 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl1P12850 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms