Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.12□□□□□ -0.47
Sh2d1aO88890 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.12□□□□□ -0.47
Sh2d1aO88890 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Gm13401-201ENSMUST00000117074 291 ntBASIC12.12□□□□□ -0.47
Sh2d1aO88890 Gm15375-201ENSMUST00000119510 849 ntBASIC12.12□□□□□ -0.47
Sh2d1aO88890 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Gm8969-201ENSMUST00000199694 526 ntBASIC12.12□□□□□ -0.47
Sh2d1aO88890 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sh2d1aO88890 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gm10418-201ENSMUST00000100943 576 ntBASIC12.11□□□□□ -0.47
Sh2d1aO88890 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gm13158-201ENSMUST00000122007 736 ntBASIC12.11□□□□□ -0.47
Sh2d1aO88890 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.11□□□□□ -0.47
Sh2d1aO88890 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Sh2d1aO88890 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.1□□□□□ -0.47
Sh2d1aO88890 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh2d1aO88890 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.09□□□□□ -0.47
Sh2d1aO88890 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms