Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hcn1O88704 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.36■□□□□ 0.21
Hcn1O88704 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.36■□□□□ 0.21
Hcn1O88704 Gm37292-201ENSMUST00000192062 758 ntBASIC16.36■□□□□ 0.21
Hcn1O88704 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hcn1O88704 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.36■□□□□ 0.21
Hcn1O88704 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.36■□□□□ 0.21
Hcn1O88704 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn1O88704 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.35■□□□□ 0.21
Hcn1O88704 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.35■□□□□ 0.21
Hcn1O88704 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Hcn1O88704 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Hcn1O88704 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Mir1199-201ENSMUST00000117015 119 ntBASIC16.35■□□□□ 0.21
Hcn1O88704 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.35■□□□□ 0.21
Hcn1O88704 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.35■□□□□ 0.21
Hcn1O88704 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.35■□□□□ 0.21
Hcn1O88704 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hcn1O88704 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hcn1O88704 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.35■□□□□ 0.21
Hcn1O88704 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.35■□□□□ 0.21
Hcn1O88704 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hcn1O88704 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.34■□□□□ 0.21
Hcn1O88704 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hcn1O88704 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Hcn1O88704 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Gm12382-201ENSMUST00000122005 922 ntBASIC16.34■□□□□ 0.21
Hcn1O88704 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.34■□□□□ 0.21
Hcn1O88704 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hcn1O88704 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hcn1O88704 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcn1O88704 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hcn1O88704 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Hcn1O88704 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Hcn1O88704 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.33■□□□□ 0.2
Hcn1O88704 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hcn1O88704 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hcn1O88704 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hcn1O88704 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hcn1O88704 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.32■□□□□ 0.2
Hcn1O88704 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.32■□□□□ 0.2
Hcn1O88704 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcn1O88704 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms