Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.08■□□□□ 0.81
NPC1O15118 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 AC012306.2-201ENST00000609350 630 ntBASIC20.08■□□□□ 0.81
NPC1O15118 AC133561.5-201ENST00000635547 218 ntBASIC20.08■□□□□ 0.81
NPC1O15118 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPC1O15118 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1O15118 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1O15118 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.08■□□□□ 0.8
NPC1O15118 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPC1O15118 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1O15118 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NPC1O15118 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.07■□□□□ 0.8
NPC1O15118 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
NPC1O15118 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 MMP23A-201ENST00000234610 1017 ntBASIC20.07■□□□□ 0.8
NPC1O15118 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.07■□□□□ 0.8
NPC1O15118 YBX1P10-201ENST00000444752 975 ntBASIC20.07■□□□□ 0.8
NPC1O15118 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.07■□□□□ 0.8
NPC1O15118 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 KRT16P1-201ENST00000399124 1418 ntBASIC20.07■□□□□ 0.8
NPC1O15118 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.07■□□□□ 0.8
NPC1O15118 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.07■□□□□ 0.8
NPC1O15118 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.07■□□□□ 0.8
NPC1O15118 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPC1O15118 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPC1O15118 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.06■□□□□ 0.8
NPC1O15118 UNC93B2-201ENST00000285383 730 ntBASIC20.06■□□□□ 0.8
NPC1O15118 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1O15118 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1O15118 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 TSPY15P-201ENST00000457163 923 ntBASIC20.06■□□□□ 0.8
NPC1O15118 TFP1-202ENST00000475455 1573 ntBASIC20.06■□□□□ 0.8
NPC1O15118 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.06■□□□□ 0.8
NPC1O15118 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.06■□□□□ 0.8
NPC1O15118 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.06■□□□□ 0.8
NPC1O15118 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1O15118 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1O15118 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NPC1O15118 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
NPC1O15118 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.05■□□□□ 0.8
NPC1O15118 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.05■□□□□ 0.8
NPC1O15118 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 AC116562.2-201ENST00000507042 360 ntBASIC20.05■□□□□ 0.8
NPC1O15118 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.05■□□□□ 0.8
NPC1O15118 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.05■□□□□ 0.8
NPC1O15118 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.05■□□□□ 0.8
NPC1O15118 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NPC1O15118 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NPC1O15118 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1O15118 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NPC1O15118 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NPC1O15118 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.04■□□□□ 0.8
NPC1O15118 C1QL1P1-201ENST00000568105 661 ntBASIC20.04■□□□□ 0.8
NPC1O15118 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.04■□□□□ 0.8
NPC1O15118 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1O15118 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1O15118 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1O15118 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1O15118 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1O15118 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NPC1O15118 AC026271.3-201ENST00000571884 352 ntBASIC20.03■□□□□ 0.8
NPC1O15118 REXO1L10P-201ENST00000615707 1290 ntBASIC20.03■□□□□ 0.8
NPC1O15118 CR392000.1-201ENST00000624770 1228 ntBASIC20.03■□□□□ 0.8
NPC1O15118 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.03■□□□□ 0.8
NPC1O15118 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1O15118 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms