Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Igkv8-28A0A0G2JE47 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm27454-201ENSMUST00000185090 204 ntBASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Igkv8-28A0A0G2JE47 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm21956-201ENSMUST00000179946 522 ntBASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv8-28A0A0G2JE47 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv8-28A0A0G2JE47 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms