Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-3A0A075B648 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav12-3A0A075B648 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.53□□□□□ -0.4
Trav12-3A0A075B648 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav12-3A0A075B648 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav12-3A0A075B648 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-3A0A075B648 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-3A0A075B648 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trav12-3A0A075B648 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-3A0A075B648 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-3A0A075B648 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Mir8112-201ENSMUST00000184382 131 ntBASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-3A0A075B648 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-3A0A075B648 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12-3A0A075B648 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms