Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12n-2A0A075B626 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12n-2A0A075B626 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Gm18958-201ENSMUST00000174258 762 ntBASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav12n-2A0A075B626 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav12n-2A0A075B626 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav12n-2A0A075B626 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav12n-2A0A075B626 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Gm16061-201ENSMUST00000122167 857 ntBASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Mir7071-201ENSMUST00000184847 69 ntBASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav12n-2A0A075B626 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms